ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1434_curated_15

Organism: scnpilot_dereplicated_Rhizobiales_11

partial RP 41 / 55 MC: 1 BSCG 39 / 51 MC: 1 ASCG 8 / 38
Location: 13656..15140

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CF2D80 related cluster n=1 Tax=unknown RepID=UPI0003CF2D80 similarity UNIREF
DB: UNIREF100
  • Identity: 70.3
  • Coverage: 508.0
  • Bit_score: 690
  • Evalue 1.70e-195
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.1
  • Coverage: 509.0
  • Bit_score: 701
  • Evalue 1.00e-198
RNA polymerase sigma-54 factor RpoN; K03092 RNA polymerase sigma-54 factor similarity KEGG
DB: KEGG
  • Identity: 69.5
  • Coverage: 508.0
  • Bit_score: 680
  • Evalue 4.30e-193

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium sp. ORS3324 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1485
ATGGCTCTGTCGGCCAAACTCCAGCTCCGCCAGTCGCAGTCGCTGGTGATGACGCCGCAGCTCATGCAGTCGATCCGGCTGCTGCAGCTCGGCCATGCGGAGCTGGAACGGTTCATCGACGCCGAGATCGAGAAGAACCCGCTGCTGGAGCGCATCGGCGACGATGCCCCTGCGGCAGCGGACGCGCCCGCCGGCGACGAGGCGGGCGACTGGAGCGCGCAGGCGATGTCGGACCGGCTCGACACGTCGCTGGAGAACGTCTTTCCCGACGATCCCGGCCGCAACGACGCGATCGCGCCAGATCTCGCCGCACAGTGGAAATCGGCCCCGGCCAGCAGGGCGACGGGCGGCGGCGAGGCGCCCGACCTCGAGGCGACGGCCGCCGCGCCCGTGACGCTCGCCGACCACCTCGCCGGGCAGATCGCGCTCACCTTCGCCGACCCGGCCGACCGGCTTATCGCGGGCGAACTCGCCGGGACGCTGAGCGATGCCGGCTATCTGGAGGCGGACACGGCAGAGCTGGCGGCGCGGCTCGGGGTCACGCCGGAGCGGGTGGAGGCGGTGCTGGCGCGCTGCCAGACGCTGGATCCCGCCGGCGTCTTCGCACGCGACCTCGCCGAATGCCTGGCGCTGCAGCTCGCGGCACGCGACCGGCTGGACCCGGCCATGGCCGCGCTGGTCGGCCATCTCGACCTGCTGGCGCGGCGCGACTTCGCGGCGCTGCGGCGCATCTGCGGGGTCGACGACGAGGATCTGGTCGACATGCTGGCCGAGATCCGCACGCTCGACCCCAAGCCGGGCGCGGGCTTCGCCTCGGGAACGGCCGATCCGGTGGTGCCGGACGTGCTCGTCTCGCCCGCCCCGGACGGGAGCTGGGCCGTCGAGCTCAATTCCGACACGCTGCCGCGCGTGCTGGTCGACCAAGCCTACCACGCCCGCATCGCCGGGGCGGCGCGGGACGCGGCCGAGCGGGAATTCCTCAGCGAATGCCTGCAGAACGCCAACTGGCTGACGCGCAGCCTCGACCAGCGCGCCCGCACCATCCTCAAGGTGGCCGGCGAGATCGTGCGCCAGCAGGACGCCTTCCTGACCCACGGCATCCGCCACCTGAAGCCGCTCAACCTGCGCACGGTGGCGGACGCCATCGGCATGCACGAATCGACCGTCAGCCGGGTGACGGCCAACAAATACATGCTGACGCCGCGCGGCGTGTTCGAGCTGCGCTTCTTCTTCACCGCCGCCATCGCCTCGGCGGAAGGCGGCGAGGCGCATTCGGCCGAGGCCGTGCGCGACCGCATCCGCGAGCTGATCGAGGGCGAGAAGCCGGTCGACGTGCTGTCCGACGACACCATTGTGGATATCCTGAGGAAAAGCGGCGTCGACATCGCCCGGCGCACGGTGGCCAAGTACCGCGAGGGCATGAACATTCCCTCGTCGGTGCAGCGGCGGCGCGAGAAGCGGGCGCTGATGGCGGCGAGCCGCTGA
PROTEIN sequence
Length: 495
MALSAKLQLRQSQSLVMTPQLMQSIRLLQLGHAELERFIDAEIEKNPLLERIGDDAPAAADAPAGDEAGDWSAQAMSDRLDTSLENVFPDDPGRNDAIAPDLAAQWKSAPASRATGGGEAPDLEATAAAPVTLADHLAGQIALTFADPADRLIAGELAGTLSDAGYLEADTAELAARLGVTPERVEAVLARCQTLDPAGVFARDLAECLALQLAARDRLDPAMAALVGHLDLLARRDFAALRRICGVDDEDLVDMLAEIRTLDPKPGAGFASGTADPVVPDVLVSPAPDGSWAVELNSDTLPRVLVDQAYHARIAGAARDAAEREFLSECLQNANWLTRSLDQRARTILKVAGEIVRQQDAFLTHGIRHLKPLNLRTVADAIGMHESTVSRVTANKYMLTPRGVFELRFFFTAAIASAEGGEAHSAEAVRDRIRELIEGEKPVDVLSDDTIVDILRKSGVDIARRTVAKYREGMNIPSSVQRRREKRALMAASR*