ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1434_curated_16

Organism: scnpilot_dereplicated_Rhizobiales_11

partial RP 41 / 55 MC: 1 BSCG 39 / 51 MC: 1 ASCG 8 / 38
Location: 15373..15849

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 modulation protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C110_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 76.7
  • Coverage: 159.0
  • Bit_score: 242
  • Evalue 2.30e-61
Sigma-54 modulation protein {ECO:0000313|EMBL:EIM75512.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.7
  • Coverage: 159.0
  • Bit_score: 242
  • Evalue 3.30e-61
ribosomal subunit interface protein similarity KEGG
DB: KEGG
  • Identity: 70.4
  • Coverage: 159.0
  • Bit_score: 222
  • Evalue 1.30e-55

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitratireductor aquibiodomus → Nitratireductor → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 477
ATGAACCTGCGCATTTCGGGTAAGCAGATGGATATCGGGGATGCGTTCCGGGCGCGCATCGAGAACCGGATCGGCGAGGCGATCGAAAAGTATTTCGACGGGGGATTCTCGGGCAAGGTCACCGTCGAGAAGTCGGGCTCCCGCTTCGGCGCCGACTGCGTCATCCATCTCGACACCGGCATGGCCTTGCAGGCGGCCGGACAGGCCCAGGACCCGCAGGGCGCCTTCGATGCGGCCGCAGAGCGCATCGAGAAGCGGCTGCGCCGCTACAAGCGGCGGCTGAAGTCGCACACGCCGTCCGGCCCCGCCGCCTCCGAGACCATCGATCTCGCCTACAGGGTGATGGCGCCCGTGGCCGGGGACGACGAGGAGGTGGCCGAAGACTACGCGCCGACCGTCGTGGCCGAATCGACGCTGGCGCTGAAGGCGATGACCGTGGCGGATGCGGTCATCGAGCTCGACACGAAGGACAGCCCC
PROTEIN sequence
Length: 159
MNLRISGKQMDIGDAFRARIENRIGEAIEKYFDGGFSGKVTVEKSGSRFGADCVIHLDTGMALQAAGQAQDPQGAFDAAAERIEKRLRRYKRRLKSHTPSGPAASETIDLAYRVMAPVAGDDEEVAEDYAPTVVAESTLALKAMTVADAVIELDTKDSP