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SCNpilot_expt_1000_bf_scaffold_1179_curated_14

Organism: scnpilot_dereplicated_Rhizobiales_11

partial RP 41 / 55 MC: 1 BSCG 39 / 51 MC: 1 ASCG 8 / 38
Location: 14127..15635

Top 3 Functional Annotations

Value Algorithm Source
Putative solute-binding component of ABC transporter n=1 Tax=alpha proteobacterium BAL199 RepID=A8TMG6_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 44.2
  • Coverage: 502.0
  • Bit_score: 401
  • Evalue 1.60e-108
Putative ABC transporter substrate-binding protein {ECO:0000313|EMBL:GAK69565.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.2
  • Coverage: 497.0
  • Bit_score: 597
  • Evalue 1.70e-167
ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 43.8
  • Coverage: 495.0
  • Bit_score: 394
  • Evalue 4.80e-107

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Taxonomy

Agrobacterium rubi → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1509
ATGAAAAGGCTTGCTTCTCGCATGCGTTCGGCAGCCCTCACCGGGCTGCTGCTGACCGCCCTCGGTGGCGTCGCCCATGCCACCGATCTGCGCATCGCGCTCGCCGACGATCCGGACGCGCTCGACACCAGGACCAACCGCGCCCAGACCGGCGTGACGGTCATGACCGTCATGTGCGACCATCTCCTGTGGACCGACAGCGAGCTGACGCTGCTGCCCGGCCTCGCCAAGAGCTGGTCCTGGTCGCCCGACGGCACCGAGCTGACGCTCGACCTCGTGGAGGGCGCGACCTTCCAGGACGGCACGCCCTTCGACGCCGAGGCGGTCAAGATCAACATCGAGCGCTACCAGACACCCGGCTCGCAGCGCGCCGACGACATCTCGACCATCAAGAGCGTGGAGGTGGTGAGCCCGTCGCGCGTGCTGATCAAGACCAGCGAGCCGAGCGCCCAGCTGCTGGGCAAGTTCGCCGAGCGCGTCGGCGTGATGTTCTCGCCGAAGGCCATCAAGGAACTGGGCGACGACCTCGGCCGCGCGCCCGTCTGCATCGGCCCCTACAAGTTCGTCGAGCGCGTGGCGCAGGACCGCATCGTGGTGGCCAAGGACCCGAACTACTACGACGCCGCCAAATACGCCTTCGACCGGGTGATCTTCCGGATCATCCCCGACGACGCGGTGCGCCTCACCAACCTTCAGGCCGGCGAAGTGGACCTGATCGAGAAGATCGACCCATCGAGCGTGGCGACCGTCGAGCAGGACGCCAAGCTCCAGCTCATCCCGCTCAAGGTGCTGAGCAACCAGACGCTGGTCATCAACCTCGACCACAAGGGCCCGCTGCAGGATCCGAAGATCCGGGAGGCGCTGGAACTGTCGCTCGACCGCCAGGCCATCGTCGACGTCGCCTTCGCCGGCCAGTACAAGGCGGGCAACCAGTTCACGCCGCCCGACTCGCCCTTCTACAACACCGACCTGCCGATGCCGGCGCGCGATCCCGCCAAGGCCAAGGCGCTCATCGCCGAGGCCGGCCTGAAGGAGCCCGTCCCCGTCACCATCCTGGTGCCGAACCGGCCGCTCCTGGTCCGGGTCGCCGAGATGATGCAGGCGATGGGTTCGGATGCGGGCTTCGACCTCAAGCTGGACGTGGTTGACTTCGGCACGACGCTGAAGCTGACGAACGAGGGCAATTTCGAGGTCTGGGGACCGATCGGCGTGCAGTTCGCCAACGACGTCGACACCGCGGCCTTCCCGGTGCTGCACTCGACCGGCGGCCGCAACCTGAGCCGCTACAAGAGCGCCGAGATGGACAAGATCCTCGAGGCCACCCGCACCGCGACCGACCCGAAGGAGCGCATGCGCTTCTTCAAGGAAGCGGCTGCGGTGGCGGTCAAGGACCGGCCGGTGATATACTTGTACCATCTGCGCCCGCTCTTCGCCGCGACGAGCAAGCTGAAGGGCTTCCACGCGACGGGCGACGCGTTCATCAGGCTGGACGGGGTGACCCTCGACTGA
PROTEIN sequence
Length: 503
MKRLASRMRSAALTGLLLTALGGVAHATDLRIALADDPDALDTRTNRAQTGVTVMTVMCDHLLWTDSELTLLPGLAKSWSWSPDGTELTLDLVEGATFQDGTPFDAEAVKINIERYQTPGSQRADDISTIKSVEVVSPSRVLIKTSEPSAQLLGKFAERVGVMFSPKAIKELGDDLGRAPVCIGPYKFVERVAQDRIVVAKDPNYYDAAKYAFDRVIFRIIPDDAVRLTNLQAGEVDLIEKIDPSSVATVEQDAKLQLIPLKVLSNQTLVINLDHKGPLQDPKIREALELSLDRQAIVDVAFAGQYKAGNQFTPPDSPFYNTDLPMPARDPAKAKALIAEAGLKEPVPVTILVPNRPLLVRVAEMMQAMGSDAGFDLKLDVVDFGTTLKLTNEGNFEVWGPIGVQFANDVDTAAFPVLHSTGGRNLSRYKSAEMDKILEATRTATDPKERMRFFKEAAAVAVKDRPVIYLYHLRPLFAATSKLKGFHATGDAFIRLDGVTLD*