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SCNpilot_expt_1000_bf_scaffold_1179_curated_15

Organism: scnpilot_dereplicated_Rhizobiales_11

partial RP 41 / 55 MC: 1 BSCG 39 / 51 MC: 1 ASCG 8 / 38
Location: 15718..16668

Top 3 Functional Annotations

Value Algorithm Source
peptide ABC transporter n=1 Tax=Pseudomonas luteola RepID=UPI00030CA782 similarity UNIREF
DB: UNIREF100
  • Identity: 59.1
  • Coverage: 313.0
  • Bit_score: 384
  • Evalue 7.60e-104
Putative ABC transporter permease protein {ECO:0000313|EMBL:GAK69602.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.5
  • Coverage: 316.0
  • Bit_score: 465
  • Evalue 8.10e-128
dppB; ABC transporter permease; K02033 peptide/nickel transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 55.6
  • Coverage: 313.0
  • Bit_score: 372
  • Evalue 1.20e-100

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Taxonomy

Agrobacterium rubi → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 951
ATGTTCAGCTTCATCGTGCGAAGGGTGCTGGCGGCGATCCCCACGCTCTTCATCATTTCGGTGATCGTCTTCAGCCTCCAGCAGCTCCTGCCGGGCGATCCGGCTCTCCTGGTCACCGGCGGCGAGGCCAGCGCCGAGACGCTTGCCCAGATCCGCGAGCAATTCGGCTTCAACGATCCCCTCGTGGTCCAGTACTGGCACTGGATCACCGACGTCTTCCACGGCGATTTCGGCACCTCCTACCGCACCCGCGAGGCGATCGGCCCGATGCTGGCGTCGAAGATCCCGGTGACGCTGACGCTCGCCACCGCCGCCATGATCATCTCGCTCGTCATCGGCATCCCGGCCGGCATCCTCGCCGCGATCTGGCGCGGCCGCGGCTGGGACCACGCAGTGACGGTGATCGCGCTGTCGGGAATATCAATCCCCAATTTCTGGCTGGGTATCATCCTGATCCTGGTCTTCGCTGTGAACCTCGGCTGGCTGCCCGCCGGCGGCTATGTCAGCTTCCTCGAAGACCCCGTCCAGTGCCTGCGCACCATCGCGATGCCTGCCTTCGTGCTCGGCGCGGCCCTAGCCGGGGCGATGATGCGCCACACGCGCAGCGCCATGCTCACCGTCATGCGGCAGGACTACGTGCGCACCGCCCGCGCCAAGGGCGTGGCCGAGAAGACCGTCATCCTCAAGCACGCCTTCCTCAACGCCCAGGTGCCGATCATCACGCTGGCGACGTTGCAGTTCGGGACGCTGCTGGCCGGCGCGGTGCTCACCGAGCAGATCTTCTCCATCCCCGGCATCGGCAAGATGGTGGTCGATGCGGTGTTCAACCGCGAATACCAGGCGGTGCAGGCGATCACGCTGCTGTCCGGCGCCGCCTTCGTGCTGATGAGCCTGCTGGCCGACGTGCTCTATTTCATCGCCAACCCCAAGCTGAGGACGAAGACGCTGTGA
PROTEIN sequence
Length: 317
MFSFIVRRVLAAIPTLFIISVIVFSLQQLLPGDPALLVTGGEASAETLAQIREQFGFNDPLVVQYWHWITDVFHGDFGTSYRTREAIGPMLASKIPVTLTLATAAMIISLVIGIPAGILAAIWRGRGWDHAVTVIALSGISIPNFWLGIILILVFAVNLGWLPAGGYVSFLEDPVQCLRTIAMPAFVLGAALAGAMMRHTRSAMLTVMRQDYVRTARAKGVAEKTVILKHAFLNAQVPIITLATLQFGTLLAGAVLTEQIFSIPGIGKMVVDAVFNREYQAVQAITLLSGAAFVLMSLLADVLYFIANPKLRTKTL*