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SCNpilot_expt_1000_bf_scaffold_6684_curated_3

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(2842..3216)

Top 3 Functional Annotations

Value Algorithm Source
Oligopeptide transport system permease protein OppC n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X1A1_RHIFR similarity UNIREF
DB: UNIREF100
  • Identity: 96.8
  • Coverage: 124.0
  • Bit_score: 241
  • Evalue 5.30e-61
ABC transporter permease; K15582 oligopeptide transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 96.8
  • Coverage: 124.0
  • Bit_score: 241
  • Evalue 1.70e-61
ABC transporter integral membrane protein {ECO:0000313|EMBL:EHK77469.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.8
  • Coverage: 124.0
  • Bit_score: 241
  • Evalue 7.50e-61

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Taxonomy

Sinorhizobium meliloti → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 375
ATGGCGCGTATCGTCCGCGGCCAGACGCTCGCCTTGAAACGCCGCGAATTCGTCGGTGCCGCCCAGGCGCTCGGCCTCACCGACTGGCAGATCATTCGCCGGCACATCATTCCCAATACCATTGGTCCGGTGGTGGTTTTCGTCACGGTCGTGGTGCCGAAAGTGATCCTCTTGGAAAGCTTTCTGTCCTTCCTCGGCCTCGGCGTGCAGGCGCCGCTAACGAGCTGGGGCGTCTTGATCGCCGAAGGCGCCAACAACATGCAGTCGGCCCCGTGGCTGCTGATCTTCCCTGCCATCTTTTTCGTCGTCACGCTGTTTTCGCTGAATTTCGTCGGCGACGGCCTGCGCGACGCGCTTGATCCGAAGGACCGCTGA
PROTEIN sequence
Length: 125
MARIVRGQTLALKRREFVGAAQALGLTDWQIIRRHIIPNTIGPVVVFVTVVVPKVILLESFLSFLGLGVQAPLTSWGVLIAEGANNMQSAPWLLIFPAIFFVVTLFSLNFVGDGLRDALDPKDR*