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SCNpilot_expt_1000_bf_scaffold_6684_curated_7

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(6633..8408)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI000375B08E similarity UNIREF
DB: UNIREF100
  • Identity: 55.7
  • Coverage: 578.0
  • Bit_score: 655
  • Evalue 4.30e-185
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EJK78322.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.3
  • Coverage: 581.0
  • Bit_score: 649
  • Evalue 3.30e-183
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase similarity KEGG
DB: KEGG
  • Identity: 55.6
  • Coverage: 572.0
  • Bit_score: 641
  • Evalue 2.60e-181

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Taxonomy

Rhizobium sp. AP16 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1776
ATGAACCCGGTTCGGTCCGAGCGAGAATTCCAGAACATCTTCCGTCGATTGCAACTCGCACTTGAATCCTCGCGGATCGGCGTCTGGGAGCACGACCCGCAAACCGACGAGGTCCTGTGGGACCTGCAGATGCATGCCCTGTACCAGACGGGGCGCACCGACCCGATCGTGCATGCCGACGACTGGACGAAGGCGCTTCATCCTGACGACATTCAAAAAGCGATGGCCGATTTCACCCAGGCCGTGGCGCACAAGGGCGCCTATTCCTCCGATTTCCGCATCGTGCTGCCGAACGGCGACATCAGGCACATCCGCTCCCGTGCCCATTATTTCGAGGAAGCCGGCCGCGCCACCCTGATCGGCGCCGAATGGGACATCACCGCCGACATCCACCTCAACCGCGAACTGACGCTGCAGAAAGCCATCGCCGAAAGGCGGGCCATCGCGCTGGAGCGCAGCCACGCGCAGATCGAACATGCTGCCGACCACGATTACCTGACCGGCCTTCCCAACCGCCGCTATTTCGACCGGCGGCTTGCCGAACTGTGCGAAGGTGGGAGCGCGCGCAGCCTGGCGATCCTGCACATCGATCTCGACAATTTCAAAGCCGTCAACGATACCCACGGCCATGCGGCCGGCGATGCGGTGCTGATGGCGACGGCACAGATCCTGCGCAACGCCGCACCGGCAGGCAGCTTCGCCTCGAGGGTCGGCGGCGACGAGTTCATCCTCATGCTGCCGGATTTCGGATCGACCGACGAGGCCATGGCGCTGGCTCGCGCGCTGGCCCGCCGGCACAAGGCGGGCGTGATGCACGACGGCACGCTGCTGAAAACCAGCCTCTCCATCGGTCTCGCCTGGACGACGGACGGGAACACCGCGTCGCTTCTGGCCGATTCCGACATCGCCCTTTATGCCGCCAAGAAGAACGGCCGCGGCCGGATCGAACGCTTCCTGCCGGCCATGAAAGAGCAACTGATCCGCGAGCGCCTTTTGACCGAGCAGTTGAAGCAGGGCCTGGAGAATGGCGACCTCGTTCCTTATTACCAGGTGCAGGTCGATGCCCGCACGCGCGCCGTGGTGGCGATGGAGGCATTGGTCCGCTGGCAGCATCCGGAGCATGGCTTGCTCCTGCCTGAAGCCTTCCTGGACATTGTCGCCGACGCCGACCTCGCCGCTCAACTTGACGAAACCGTCCTGCTTCGGGTTCTCGCCGATCGCCTTGTTTGGCAATCGGCGGGAATTGCCGTGCCGCGAATCTCCATCAACATCTCCGCCGGCCGGCTCGCCGAACCCAGTCTGCTGCAGCAGCTCGCCAAACTGCATATCGAACCGGATGCCATAAGTTTCGAATTGCTGGAAACCATCTTTCTCGACGAACTCGACGATACAGCGCTCTCCAATATCCAGAAGCTGAAGCATATGGGTATCGATGTCGAGTTCGACGATTTCGGCTCTGGCCATGCCTCCATCGTCGGTCTCGTCAAGCTGAAGCCCAAGCGTCTCAAAATAGACCGGCGGCTGGTGTTTCCGATTATCGCCTCGGCGGAACAGACCAGCCTGGTCAGTTCCATCGTCGACATCGCCCGGACGCTGAACATCGAAGTCATAGCAGAAGGCGTGGAAACGCTGGAACATGCCGAGATACTGGCCAATCTCGGTTGTCAGATCCTCCAGGGCTATGCGATCGCCTTTCCATTGTCGGCCGTCGATCTCGGCGCCTATCTCGGCAAGCACGGCAAGCAGGCTGCACCGGCAGTGCTGCACGACGCCTGA
PROTEIN sequence
Length: 592
MNPVRSEREFQNIFRRLQLALESSRIGVWEHDPQTDEVLWDLQMHALYQTGRTDPIVHADDWTKALHPDDIQKAMADFTQAVAHKGAYSSDFRIVLPNGDIRHIRSRAHYFEEAGRATLIGAEWDITADIHLNRELTLQKAIAERRAIALERSHAQIEHAADHDYLTGLPNRRYFDRRLAELCEGGSARSLAILHIDLDNFKAVNDTHGHAAGDAVLMATAQILRNAAPAGSFASRVGGDEFILMLPDFGSTDEAMALARALARRHKAGVMHDGTLLKTSLSIGLAWTTDGNTASLLADSDIALYAAKKNGRGRIERFLPAMKEQLIRERLLTEQLKQGLENGDLVPYYQVQVDARTRAVVAMEALVRWQHPEHGLLLPEAFLDIVADADLAAQLDETVLLRVLADRLVWQSAGIAVPRISINISAGRLAEPSLLQQLAKLHIEPDAISFELLETIFLDELDDTALSNIQKLKHMGIDVEFDDFGSGHASIVGLVKLKPKRLKIDRRLVFPIIASAEQTSLVSSIVDIARTLNIEVIAEGVETLEHAEILANLGCQILQGYAIAFPLSAVDLGAYLGKHGKQAAPAVLHDA*