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SCNpilot_expt_1000_bf_scaffold_6684_curated_6

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(4895..6496)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein n=1 Tax=Rhizobium meliloti RepID=UPI000367724C similarity UNIREF
DB: UNIREF100
  • Identity: 86.6
  • Coverage: 523.0
  • Bit_score: 935
  • Evalue 3.30e-269
ABC-type oligopeptide transport system periplasmic component {ECO:0000313|EMBL:EYR78739.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.8
  • Coverage: 530.0
  • Bit_score: 936
  • Evalue 2.10e-269
ABC transporter substrate-binding protein; K15580 oligopeptide transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 86.6
  • Coverage: 523.0
  • Bit_score: 933
  • Evalue 2.30e-269

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1602
ATGAAGGCATTCACGTTCAATCGTCATGTCGCGGCCCTGCTGGTCGGCTCGATGCTGATCGGCGCCAGTCCGGCGCTGGCCGAAACCGTCCTTCATCGCGGCAATGCCGGCGAGCCGCAGACGCTCGACCAGGCGCACACCTCCATCAATATCGAGGAATTCATTCTCAAGGATCTCTATGAAGGCCTGACGATCTACGACGCCGGCGGCAAGATCGTGCCCGGTGCCGCGGAAAGCTGGACGGTCTCCGACGACGGCACCGTCTATACCTTCAAGCTGCGCGACAACGGCAAGTGGTCGGACGGTTCGCCGGTGACGGCGGACGATTTCGTCTTCTCCTTCCAGCGTGTCGAAGATCCGAAGACGGCGGCCGGTTATGCCAACATCCTCTATCCCGTGAAGAACGCCGAAAAGGTCAACAAGGGCGAAGTCGCCGTCGACCAGCTCGGCATGAAGGCCGTGGACGCCAGGACGCTGGAAATCACCCTGGAGCGCCCGACCCCCTTCTTCCTCGAACTTTTGGCGCACCAGACGGCGCTGCCGGTCAGCAAGGCAAGCGTCGAGAAGAACGGCGCCGACTTCGTCAAGCCCGGCACCATGGTGTCGAACGGCGCCTTCAAGCTCGTCAGCCACGTGCCGAACGACAATCTTGTCGTCGAGAAGAATCCGAACCACTGGGACGCCGCCAACGTCAAGCTGGACAAGGTGATCTTCTATCCGATCGACGACCAGGCCGCCTCGATCCGCCGCTTCGAGGCCAAGGAGATGGACCTCGTCTACAATTTCTCGGCCGACCAGATCGATCGCCTGCGCACGGCTTACAACAGCCAGGTGCACGTCTCGCCGACGCTCGCCACCTATTATTACGCCTTCGATACCCGCAGCGAACCCTATAGCGACGTCCGCGTCCGCCGGGCGCTGTCCATGGCCGTCGACCGCGACTTCCTGGCCAAGGAAATCTACAGCGGCTCGCAGATCCCGGCCTATTCGATGGTGCCGCCCGGCATCGAGAGTTACGGCGAACCGTCGCGTGCCGATTTTGCCGGAGACTCGCAGCTGGATCGCGAGGACAAGGCCGTCGCCCTGATGAAGGAAGCCGGCTACGGCGAAGGCGGCAAGCCGCTCGCCATCGAGATCCGCTACAACACCAACCCGAACCACGAGCGTGTCGCCACCGCCGTCGCCGACATGTGGAAGAACACCTTCGGCGCCACCGTGACCATGGTCAATCTCGACGTCTCCTCGCATTACGCCTACCTGCAGGAAGGCGGCAAGTTCAACGTCGCCCGCGCCGGCTGGGTGGCGGATTACGCCGATGCCGAAAACTTCCTGGCGCTCAGCGTCAGCACCAACAAGACCTTCAACTACGGCAGCTTCAACAATCCTGATTACGACGCCCTGATGAAGAAGTCCTATGAGGAACGCGACCCGGCGGCCCGCTCGAAGGTGCTGCATGAGGCGGAAGCCCTGCTGATGCAGGAACAGCCGGTCGCGCCGTTGCTCACCCAGGCCGACCTCTGGATGGTCTCCGACCGCGTCAAGGGCTGGGAAGACAACGCCGCCAACCAGCATCTCAGCCGCTTCCTGAGCGTTTCCGAATAA
PROTEIN sequence
Length: 534
MKAFTFNRHVAALLVGSMLIGASPALAETVLHRGNAGEPQTLDQAHTSINIEEFILKDLYEGLTIYDAGGKIVPGAAESWTVSDDGTVYTFKLRDNGKWSDGSPVTADDFVFSFQRVEDPKTAAGYANILYPVKNAEKVNKGEVAVDQLGMKAVDARTLEITLERPTPFFLELLAHQTALPVSKASVEKNGADFVKPGTMVSNGAFKLVSHVPNDNLVVEKNPNHWDAANVKLDKVIFYPIDDQAASIRRFEAKEMDLVYNFSADQIDRLRTAYNSQVHVSPTLATYYYAFDTRSEPYSDVRVRRALSMAVDRDFLAKEIYSGSQIPAYSMVPPGIESYGEPSRADFAGDSQLDREDKAVALMKEAGYGEGGKPLAIEIRYNTNPNHERVATAVADMWKNTFGATVTMVNLDVSSHYAYLQEGGKFNVARAGWVADYADAENFLALSVSTNKTFNYGSFNNPDYDALMKKSYEERDPAARSKVLHEAEALLMQEQPVAPLLTQADLWMVSDRVKGWEDNAANQHLSRFLSVSE*