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SCNpilot_expt_1000_bf_scaffold_6684_curated_5

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(3931..4182)

Top 3 Functional Annotations

Value Algorithm Source
Oligopeptide transporter subunit membrane component of ABC superfamily n=1 Tax=Rhizobium sp. IRBG74 RepID=U4QAU3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 96.4
  • Coverage: 83.0
  • Bit_score: 161
  • Evalue 4.70e-37
oligopeptide ABC transporter, membrane spanning protein; K15581 oligopeptide transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 96.4
  • Coverage: 83.0
  • Bit_score: 161
  • Evalue 1.50e-37
ABC transporter, membrane spanning protein (Oligopeptide) {ECO:0000313|EMBL:CDN94936.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.4
  • Coverage: 83.0
  • Bit_score: 161
  • Evalue 6.60e-37

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 252
ATGCGCGCGGCCATGCTGCCGGTGGTTTCTTACCTGGCACCCTGCGCCGCGGCGCTGCTGACCGGCTCGGCCGTGGTCGAGACGATCTTCACCATTCCCGGTGTCGGCCGCTATTTCGTGCTCGGCGCCCTCAACCGCGACTATACGCTGGTGATGGGCACGGTGGTGCTGATCGCCATCTTCGTCATCCTCTTCAACCTTATGGTCGATATCCTCTACGGCCTGCTGGATCCGAGGGTCCGCCATGACTGA
PROTEIN sequence
Length: 84
MRAAMLPVVSYLAPCAAALLTGSAVVETIFTIPGVGRYFVLGALNRDYTLVMGTVVLIAIFVILFNLMVDILYGLLDPRVRHD*