ggKbase home page

SCNpilot_expt_1000_bf_scaffold_983_curated_19

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(25280..25543)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI000374DF35 similarity UNIREF
DB: UNIREF100
  • Identity: 58.8
  • Coverage: 80.0
  • Bit_score: 103
  • Evalue 9.40e-20
Putative integral membrane protein linked to a cation pump {ECO:0000313|EMBL:CDM60036.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.4
  • Coverage: 83.0
  • Bit_score: 103
  • Evalue 1.70e-19
FixH family protein similarity KEGG
DB: KEGG
  • Identity: 53.8
  • Coverage: 80.0
  • Bit_score: 96
  • Evalue 3.60e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. LPU83 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 264
GTGCGCGGCGGCGTGATTGCATACGATCTGCGCAACCGCGACGGATCGCCGGCGGCAGCCGATTCGGTGACCGTGCATTTCAAACGGCCGGTCGGCGACCATCAGGATTTTGCCACGGACCTGACGAAGGCAGGCGAGGGCCGTTTCGAGAAGGCTTACGACGTTCCCGTCGGCGAATGGATTGCCGAAATCGTCTCGAAGCGCGGCGAAGAGACCATCATGCACGAGGCGTTCCGCTTCCATGTCGGGGAGGGCGCGTTGTGA
PROTEIN sequence
Length: 88
VRGGVIAYDLRNRDGSPAAADSVTVHFKRPVGDHQDFATDLTKAGEGRFEKAYDVPVGEWIAEIVSKRGEETIMHEAFRFHVGEGAL*