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SCNpilot_expt_1000_bf_scaffold_983_curated_20

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(25550..25780)

Top 3 Functional Annotations

Value Algorithm Source
Nitrogen fixation protein fixH n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0PYD4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 75.0
  • Coverage: 68.0
  • Bit_score: 113
  • Evalue 1.40e-22
Putative integral membrane protein linked to a cation pump {ECO:0000313|EMBL:CDM60036.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.6
  • Coverage: 67.0
  • Bit_score: 115
  • Evalue 3.80e-23
FixH family protein similarity KEGG
DB: KEGG
  • Identity: 72.7
  • Coverage: 66.0
  • Bit_score: 104
  • Evalue 1.20e-20

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Taxonomy

Rhizobium sp. LPU83 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 231
ATGAACGCCATTCCAAACAATCCGGCCGGCAAGGGATTTACCGGGCGCCACATGCTGGCGATCATGCTCGCCTTCTTCGGCGTGGTGATCGGCGTCAACATGCTGATGGCCTGGTATGCGACAACAAGCTGGAGCGGCCTGATCGTCGAAAACACCTATGTCGCCAGCCAGCAGTTCAACGGCCGGGCGGCGGCGATGCGGGCGATGGCGGCGAGCGGCATCGCCGGCTAG
PROTEIN sequence
Length: 77
MNAIPNNPAGKGFTGRHMLAIMLAFFGVVIGVNMLMAWYATTSWSGLIVENTYVASQQFNGRAAAMRAMAASGIAG*