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SCNpilot_expt_1000_bf_scaffold_1867_curated_5

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(2944..3825)

Top 3 Functional Annotations

Value Algorithm Source
glycerol-3-phosphate transporter permease n=1 Tax=Rhizobium radiobacter RepID=UPI0003741524 similarity UNIREF
DB: UNIREF100
  • Identity: 87.0
  • Coverage: 293.0
  • Bit_score: 523
  • Evalue 1.70e-145
Glycerol-3-phosphate transporter permease {ECO:0000313|EMBL:KDR87392.1}; TaxID=1315272 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens GW4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.0
  • Coverage: 293.0
  • Bit_score: 523
  • Evalue 2.30e-145
Putative sugar ABC transporter (permease protein); putative glycerol 3-phosphate transport protein, ugpA-like protein similarity KEGG
DB: KEGG
  • Identity: 86.0
  • Coverage: 293.0
  • Bit_score: 519
  • Evalue 7.50e-145

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 882
ATGAAACGCGTGCAATTTTCGTCGCCCTACCTGCCCTATGTCTTCCTGGCGCCGCAACTCGCCGTGATCGTCATCTTTTTCTACTGGCCTTCGGTGCAGGCGATCCAGTCGTCCTTTTATCTTGAAGATCCCTTCGGTTTCGGCTCGACCTTCGTCGGCCTCAGCAACTACGCCGATGCCTTCGCCAGCGCCGAATATGGCAGGATCGCCCGCTTCACCGTGGTGTTCACCGGGCTCGTTACCTTCTTTTCGCTGTCGCTTGGCCTGTTGCTCGCCGTCAAGGCGGATGCGGTCATTCGCGGCAATGCCGCCTACAAGACGTTGCTGATTTCCGTCTATGCGATTGCCCCGCCGGTCGCCGGCCTGATCGGCATGATGTTCTTCGACCAGCATATCGGCCCCTTCGTCAAGATCGCCGCCTTCTTCGGCTGGGAGATGAAGGTCGGGCTCAACTATGTCGACACCGCCTTCGCCATGGTGGTCGTCGCGGTCTGGAAACAGATCCCCTACAATTTCATCTTCTTCCTGTCCGGGCTGCAGAGCGTGCCCGTCTCGGTGCGCGAGGCCGCCGCCATCGACTGCCGCTCCGGCTTCCGGCGCTTCTGGACGGTGGTGCTGCCGCTGCTCGCACCGACCGCCTTCTTCCTCCTGGTGATCAACATCACCTATTCGCTGTTCGATACCTTCGGCATCATCGACGTCATGGTGAAGGACAAGGCCGCCAACAACCCGATCACGCTGGTCTACAAGGTCTATATGGACGGCTTCCGCGGCAACGATATCGGCGGCTCCTCGGCCCAGTCGGTCATCCTGATGGTCGTCGTCTTCGTGCTCACCATCCTGCAGTTCCGCTTCATCGAGCGGCGCGTGCATTACACCTGA
PROTEIN sequence
Length: 294
MKRVQFSSPYLPYVFLAPQLAVIVIFFYWPSVQAIQSSFYLEDPFGFGSTFVGLSNYADAFASAEYGRIARFTVVFTGLVTFFSLSLGLLLAVKADAVIRGNAAYKTLLISVYAIAPPVAGLIGMMFFDQHIGPFVKIAAFFGWEMKVGLNYVDTAFAMVVVAVWKQIPYNFIFFLSGLQSVPVSVREAAAIDCRSGFRRFWTVVLPLLAPTAFFLLVINITYSLFDTFGIIDVMVKDKAANNPITLVYKVYMDGFRGNDIGGSSAQSVILMVVVFVLTILQFRFIERRVHYT*