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SCNpilot_expt_1000_bf_scaffold_1867_curated_6

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(3896..5194)

Top 3 Functional Annotations

Value Algorithm Source
sn-glycerol 3-phosphate ABC transporter substrate-binding protein n=1 Tax=Rhizobium giardinii RepID=UPI00035E2B8E similarity UNIREF
DB: UNIREF100
  • Identity: 88.4
  • Coverage: 432.0
  • Bit_score: 795
  • Evalue 2.50e-227
Strain MEJ076 contig_4, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ04744.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.5
  • Coverage: 432.0
  • Bit_score: 785
  • Evalue 3.70e-224
ugpA; ABC transporter substrate-binding protein (sn-glycerol 3-phosphate); K05813 sn-glycerol 3-phosphate transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 87.3
  • Coverage: 432.0
  • Bit_score: 777
  • Evalue 1.70e-222
  • rbh

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1299
ATGATCAAGACCATCTCGATGGCTGCGCTCGCAGTCAGCTTCACGGCCACGTCGTCGTTTGCCGCGACCAACATCACCTGGTGGCACGGCATGGGCGGACGCAACGGCGAAGTGATCAATGAAGTCGCTCAGAAGTTCAACGCCGCCCAGACGGCCTGCGCCCTGACCCCGGTTTCCAAGGGCACCTACGAAGAGGCGCTCGCCGCCGGCATCGCCGCTTTCCGTTCGGGCGAGCAGCCGAACATCCTGCAGGTGTTCGACGCCGGCGCGGCGACGATCATCAACGCCAAGGGCGCGGTCATTCCGGCCGAAGACCTGATCACCAAGGCAGGCTACGCCTTCGACCGCGACGCCTTCATCGAAGGCGTGAAGTATTTCTACGCTGCCGCTGACGGCAAGTTCGTCGGCATGCCGTTCAACTCCTCGGCGCCGATCATGTACATCAACGACGAAGCCTTGAAGAAGGCCGGCGTCGAAGCGCCGAGCACCTGGGAAGAGTTCGAAGCCATCGCTCCGAAGCTCAAGGAAGCCGGTTACATCCCGCTCGTCCAGTCGCAGCTGACCTGGGAGTTCACCGAGAACTTCTTCTCGCGCAACAACATCCAGTTCGCCACCAACAACAACGGTTACGACAGCGTGGTCGACACCAAGATGCAGCTCACCAATCCGCAGCTGGTGATGATGTTCGACAAGCTCAAGGGTTGGGCCGACCAGGGTTACTTCGCTTATTACGGCGCCGGCTGGTCCGACAACCAGAAGCCGTTCGAAGAAAACAAGGTCGCCCTGTGGATCGGTTCGTCGGGCTCCTTCGGCGGCCTGCAGAAGACTGCCCAGATGCCGTTCTCGGCAACCTTCCTGCCGTACTGGGGTTCGATCGAGGGCGCCGGCACCAACACCTTCATCGGCGGTGCCGCCCTGTTCGCCATGTCGGGCAAGTCCGACGAAGAAAACAAGTGCGTTGCCGACTTCTTCCAGTTCCTGACCTCGCCGGAAATCCAGAAGTTCTACCACCAGGCCACCGGCTACGTCGCCATCACCAAGGCTGCTTACGAGCTTGCCAAGGCTGAAGGCTACTACAACGAGAAGCCGGCTGCCGAAGTCGGCATCAAGCAGCTGATGCTGCCGTCGGGCGAATGGTCGAAGGGTTACCGCCTCGGCTTCTACCCGCAGATCCGCGAAATCATGGAACGCGAATACGGCCGCATTTTCGCCGGTGAAACCACTCCGAAGGAAGCTTTCGAGACGATCGAAAAGGAAGGCAACGACCTTCTCGGCCGCTTCGCCAAGACGGCGGGCTGA
PROTEIN sequence
Length: 433
MIKTISMAALAVSFTATSSFAATNITWWHGMGGRNGEVINEVAQKFNAAQTACALTPVSKGTYEEALAAGIAAFRSGEQPNILQVFDAGAATIINAKGAVIPAEDLITKAGYAFDRDAFIEGVKYFYAAADGKFVGMPFNSSAPIMYINDEALKKAGVEAPSTWEEFEAIAPKLKEAGYIPLVQSQLTWEFTENFFSRNNIQFATNNNGYDSVVDTKMQLTNPQLVMMFDKLKGWADQGYFAYYGAGWSDNQKPFEENKVALWIGSSGSFGGLQKTAQMPFSATFLPYWGSIEGAGTNTFIGGAALFAMSGKSDEENKCVADFFQFLTSPEIQKFYHQATGYVAITKAAYELAKAEGYYNEKPAAEVGIKQLMLPSGEWSKGYRLGFYPQIREIMEREYGRIFAGETTPKEAFETIEKEGNDLLGRFAKTAG*