ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1867_curated_7

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(5309..5677)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI000366DEA4 similarity UNIREF
DB: UNIREF100
  • Identity: 72.1
  • Coverage: 122.0
  • Bit_score: 174
  • Evalue 7.90e-41
hypothetical protein; K07460 putative endonuclease similarity KEGG
DB: KEGG
  • Identity: 73.6
  • Coverage: 121.0
  • Bit_score: 173
  • Evalue 4.20e-41
UPF0102 protein RCCGEPOP_06396 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.9
  • Coverage: 121.0
  • Bit_score: 173
  • Evalue 1.90e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. Pop5 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 369
ATGGACGCTGATCCTCTCGGCAAGAAACGGAAAAAGGCCGAACGTCGCGGCCGCGCGAGCGAGTACGTCGCCGCCCTCTACCTTTTCTTGAAGGGATATCGCATCGTCGCGATGCGCTACCGCACCAGGGCAGGCGAGGTGGATATCATCGCCCGCCGCGGCGACCTTGCCGTCTTCGTCGAGGTCAAGGCGCGGCGCGAGGGGGGGTTGGCCGTCGATGCCGTCGGTTTTGCCGCGCAGCAACGTATCCGTGCAGCCTCGGATATCTGGCTTTCCCGCCAGGCCGATGCATTCCGCCTGTCGCAGCGCTACGACATCGTCGCGGTGTTGCCCGGCCGGTTGCCACGCCATTTTCGCGATGCTTTTTGA
PROTEIN sequence
Length: 123
MDADPLGKKRKKAERRGRASEYVAALYLFLKGYRIVAMRYRTRAGEVDIIARRGDLAVFVEVKARREGGLAVDAVGFAAQQRIRAASDIWLSRQADAFRLSQRYDIVAVLPGRLPRHFRDAF*