ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2461_curated_2

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 1141..1821

Top 3 Functional Annotations

Value Algorithm Source
Response regulator id=2549652 bin=GWF1_Rhodobacteraceae_65_7 species=Oligotropha carboxidovorans genus=Oligotropha taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 59.5
  • Coverage: 222.0
  • Bit_score: 234
  • Evalue 1.20e-58
response regulator similarity KEGG
DB: KEGG
  • Identity: 43.0
  • Coverage: 228.0
  • Bit_score: 184
  • Evalue 4.40e-44
Tax=GWF1_Rhodobacteraceae_65_7_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 59.5
  • Coverage: 222.0
  • Bit_score: 234
  • Evalue 1.70e-58

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWF1_Rhodobacteraceae_65_7_curated → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 681
ATGGACGTGGTATCGGCTCGCAACGTCATCGTCGTCGAAGACAACCGGGAAACACGCCAGTGGATCTGCGAGACGCTGCGTCATCATTTCGATCGCGCCAACCCTCTGCCCGCCGCCAATTGCGAGGAGGCCGAAGCCATTCTGGACGATGCCGAGGCGCATGGGCACAAGATCGACCTGGCGCTGGTCGACATCAATTTGCCGGACGGCAGCGGCATCGCCATCATCCAGCGGATCGCCCGCAGCTTTCCGGAAACGCTGCCCGTCGTGGTGACGATTTTCGAGGATGACGCGACGCTGTTCAACGCGCTGGCCGCGGGTGCCCGCGGTTATGTCCTCAAGGGGGTGAAAACCGAAAGCCTGGTGGAGCAGATCCGGCGCATCGAACACGGCGAACCGCCGATCTCGCCGCAGATCGCCCACCGCATCCTTGCCTATTTCCGCGGAAAGTTGCCGCATGCGCCGGTGCAGGATGCAACCGACAACACCGACCGGCTGACGCAGAGGGAAATGGAAATCCTGCGCCTGCTCGGCAAGGGCCTGACCGCCATGGACATCAGCGTCGCGCTCGGCATTTCCCGCAATACCTGTACCACCCACATCAAGGCGATCTATCGCAAGCTCGGCATCTCCACCCGGGCCGAGGCGGCGCTGGAGGCGAACCGCCGCGGCCTTGTCTAA
PROTEIN sequence
Length: 227
MDVVSARNVIVVEDNRETRQWICETLRHHFDRANPLPAANCEEAEAILDDAEAHGHKIDLALVDINLPDGSGIAIIQRIARSFPETLPVVVTIFEDDATLFNALAAGARGYVLKGVKTESLVEQIRRIEHGEPPISPQIAHRILAYFRGKLPHAPVQDATDNTDRLTQREMEILRLLGKGLTAMDISVALGISRNTCTTHIKAIYRKLGISTRAEAALEANRRGLV*