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SCNpilot_expt_1000_bf_scaffold_2461_curated_3

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 1950..2432

Top 3 Functional Annotations

Value Algorithm Source
Putative transcription elongation factor n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3MGQ2_RHISN similarity UNIREF
DB: UNIREF100
  • Identity: 81.2
  • Coverage: 160.0
  • Bit_score: 259
  • Evalue 1.90e-66
transcription elongation factor regulatory protein similarity KEGG
DB: KEGG
  • Identity: 81.2
  • Coverage: 160.0
  • Bit_score: 259
  • Evalue 5.90e-67
Putative transcription elongation factor {ECO:0000313|EMBL:ACP24167.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.2
  • Coverage: 160.0
  • Bit_score: 259
  • Evalue 2.60e-66

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Taxonomy

Sinorhizobium fredii → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 483
TTGAGCGTTGCCTTCGTCAAGGAAGAGAGTGCCGAAGCTGCTTCCGAAACCCTTCTGCCCGACCGCCCCGTCTCGCCCCATCCCAACCTGGTGACCCGGGCGGGGCTGCAGGCGCTGGAGCAGCAATTGCGGCTGGCGCGCGAAGCCTATGATGCGGCCGGTTCGATCGAGGACGTCAACGAGCGGCGGCGGCAGGCGGCAGGCCCCCTCAGGGACCTGCGATATCTTGCCGAGCGCGTCCGCACCGCCCAGGTCATGCCCGATCCGGCATCCGCCGAGGTCGTCGCCTTCGCGAGCACGGTGACCTTCCACCGGGACGACGGACGGGTGCAGACCTACCGTATCGTCGGCGAGGACGAAGCCGATCCGAAAGCCGGCTCGATTTCCCACGTGTCGCCGGTGGCGAGGCTGCTGATGGGCAAGGCCGTCGGGGATGTGGTCACTGTCGGCAACCAGGAACTCGAAATCGTCGCCATCGCCTGA
PROTEIN sequence
Length: 161
LSVAFVKEESAEAASETLLPDRPVSPHPNLVTRAGLQALEQQLRLAREAYDAAGSIEDVNERRRQAAGPLRDLRYLAERVRTAQVMPDPASAEVVAFASTVTFHRDDGRVQTYRIVGEDEADPKAGSISHVSPVARLLMGKAVGDVVTVGNQELEIVAIA*