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SCNpilot_expt_1000_bf_scaffold_887_curated_6

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 5369..6094

Top 3 Functional Annotations

Value Algorithm Source
Leucine/isoleucine/valine transporter subunit ATP-binding component of ABC superfamily n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FG25_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 84.2
  • Coverage: 241.0
  • Bit_score: 396
  • Evalue 1.50e-107
High-affinity branched-chain amino acid transport ATP-binding protein LivF {ECO:0000313|EMBL:EYR81066.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.8
  • Coverage: 241.0
  • Bit_score: 403
  • Evalue 2.20e-109
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 54.7
  • Coverage: 236.0
  • Bit_score: 260
  • Evalue 4.00e-67

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 726
ATGACGGCTGCGACGTTACCGCCTGTCCTGAGCCTGAAGAATATCGTCTCCGGTTATGGCGGGCTCGATATCCTCAAGGGCATCTCGCTTGACGTCGGCGCCGGCGAATTCGTCACCGTCGTCGGCCCCAACGGCCACGGCAAATCGACCCTGTTGAAGACGATTTCCGGGCTGGTGCCGCTGCGCGCCGGTTCGATCAGCATCGACGGCACCGAGGTCACCGGCAAGCCGCATACCGTCGCCGGCCTCGGCGTCGCGCATGTGCCGCAGGGCGACATGCTGTTTCCGGAAATGAGCGTGCTCGAAAACCTTTTGATGGGCGCCTATCTGGCGCCGGGCAAGGCGGAAATCGACCGCCGGCTCGACGAGGTCTATACGCTGCTGCCGAAACTCTCCGACCGCCGCCACCAGATCGCCTCGACGCTGTCGGGCGGCGAGCGGCGCATGGCCGGCATCGGCCGCGGGCTGATGATGGGCGGGCGCATCCTGCTGATCGACGAACCGTCGCTGGGGCTGGCGCCATTGATCATCGAACAGATCTACGGCGTCATCGCCGAACTGAGCAAGACGGGGCGGACCATCCTGCTGGTCGAGGAAAACCCCGCCCGCGTCGAAGATCTCGCCGACAAGCTGCATCTTCTCGACGACGGCGCAATCGTCTGGTCCGGCCCGCCGGCCGACCTTCTCGCCCGCGAGGAACTGCTCGCAACCTATCTCGGAGGCTGA
PROTEIN sequence
Length: 242
MTAATLPPVLSLKNIVSGYGGLDILKGISLDVGAGEFVTVVGPNGHGKSTLLKTISGLVPLRAGSISIDGTEVTGKPHTVAGLGVAHVPQGDMLFPEMSVLENLLMGAYLAPGKAEIDRRLDEVYTLLPKLSDRRHQIASTLSGGERRMAGIGRGLMMGGRILLIDEPSLGLAPLIIEQIYGVIAELSKTGRTILLVEENPARVEDLADKLHLLDDGAIVWSGPPADLLAREELLATYLGG*