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SCNpilot_expt_1000_bf_scaffold_887_curated_7

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 6098..6988

Top 3 Functional Annotations

Value Algorithm Source
Inner-membrane translocator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CN37_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 84.0
  • Coverage: 294.0
  • Bit_score: 497
  • Evalue 1.30e-137
Amino acid/amide ABC transporter membrane protein 1, HAAT family {ECO:0000313|EMBL:EYR81065.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.0
  • Coverage: 294.0
  • Bit_score: 497
  • Evalue 1.80e-137
inner-membrane translocator similarity KEGG
DB: KEGG
  • Identity: 52.0
  • Coverage: 294.0
  • Bit_score: 304
  • Evalue 3.80e-80

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 891
ATGACGCTCGACATTCTCATGTCCATTCTCGTCGCCGGCATCACCACCGGCGCCCTCTACGCGCTTGCAACCGTCGGCCTCTCCCTCGTCTGGGGCTCGATGGGCATGCTCAACATGGCGCATGCGGCGATGCTGACCATGGGTGGATACGCCGCCTTCACGGTGTCGTCGGCGCTCGGCCTGCCCGTCATCGCCGGTTTTGCTGGAGCAATCGTCATCGGCATGATCGGCGGCAGCCTGCTTTACGTGCTGATCGTCCGCAACCTGCTGAAGAACGACAAGTCGACCTTCGAATCCAACGTCATGATCGCCACCGTCGGCATCGGCATCGCGCTGGAGAACGCCATCCTGATGATCTATGGCGGACAGCCATTGAAGCAGCCGCTGTCGATCCCCGGCACGCTGATGCTCGGGCCGCTCGCCCTGCCCTACCAGAACATCGTCATCATCCTGACCGTCGTGGTGCTGATGGCCTTCATCGCGCTGCTGCTCAACCGCACTCGCATGGGCCGGGCGATCCGCGCCACGGCGCAGAACCGCGATGCGGCGCAGCTGATGGGCGTTGCCGTCAACCGCGTCTATTTCCAGGTCCTGGTGCTGTCCGGCGGCCTCGCCGGCATCTGCGGCGTCATGGTGAGCTCGATCACACAGCTGTCGCCGCCGCTCGGCAACGACCCCATGCTCAAGGCCTTCATCATGTGTGTCGTCGCCGGCCTCGGCAACCTGCCGGGCGCGGTCGCCGCCGCCTTCGGCCTCGCTTTGTTCGAAGCCTTCATCCAGTATGCCGCCGGTGCCCGCTGGGGTTTCCCGTCGCTGCTCTTCGTCGTCATCGCCGTGCTGATCTGGCGCCCGTCCGGTCTGTTCGGCCGCGCCCAGATCCGCCGCCTGTGA
PROTEIN sequence
Length: 297
MTLDILMSILVAGITTGALYALATVGLSLVWGSMGMLNMAHAAMLTMGGYAAFTVSSALGLPVIAGFAGAIVIGMIGGSLLYVLIVRNLLKNDKSTFESNVMIATVGIGIALENAILMIYGGQPLKQPLSIPGTLMLGPLALPYQNIVIILTVVVLMAFIALLLNRTRMGRAIRATAQNRDAAQLMGVAVNRVYFQVLVLSGGLAGICGVMVSSITQLSPPLGNDPMLKAFIMCVVAGLGNLPGAVAAAFGLALFEAFIQYAAGARWGFPSLLFVVIAVLIWRPSGLFGRAQIRRL*