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SCNpilot_expt_1000_bf_scaffold_2444_curated_28

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(26354..27376)

Top 3 Functional Annotations

Value Algorithm Source
LacI family transcriptional regulator n=1 Tax=Rhizobium sp. CCGE 510 RepID=J5PZI8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 92.6
  • Coverage: 340.0
  • Bit_score: 628
  • Evalue 5.50e-177
LacI family transcriptional regulator {ECO:0000313|EMBL:EJT04058.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.6
  • Coverage: 340.0
  • Bit_score: 628
  • Evalue 7.80e-177
LacI family HTH-type transcriptional repressor similarity KEGG
DB: KEGG
  • Identity: 92.4
  • Coverage: 340.0
  • Bit_score: 625
  • Evalue 8.60e-177

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Taxonomy

Rhizobium sp. CCGE 510 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1023
GTGGCTCAAAAGATCAAACTGTCGACCATTGCGGAAACGCTGGGGATCTCCACCGCAACCGTATCCCTTGCCTTACGCGACAGCCCGCTGGTGGCGACCACCACCCGCGACCGGATCAAGGAACAGGCCCGCGCCCTCGGCTATATCTACAATCGCCGCGCCGCCAGCCTGCGCACCTCGCGCTCGGGCATCATCGGCGTCGTCGTGCACGACATCATGAACCCGTTCTACGGCGAAATCCTCAAGGCGATCGAAAGCGAGCTGGACCGCAGCCAGCATACCTTCATCCTGTCCAACCACTACGATTCGGTGGAGAAGCAGCGCAGCTTCGTCGAGACGCTTTTGCAGCTCGGCGGCGACGGCGTGATCATGTCGCCGGCCATCGGCACGCCCATCGAGGACATGAAGCTGGCCGAGGACAACGGCATGCCGGCCATCCTCGTCGCCCGCTCGATGGAGGGCGTCGATATGCCCACCTATCGCGGCGACGACAGCTACGGCATTTCGCTTGCCACCAATCACCTGATCAGCCTCGGCCATCGCACCATCGCGATGATCGGCGGCACCGACCAGACGTCGACCGGGCGCGACCGTTACCAGGGATATGTCAATGCGCTCCGCAAGGCCGGCATGGAGGTCGATCCCAACCTGCGCATTCCGGGGCCGCGCTCGAAGCAGGGCGGTTTCGAGGCCGCCGTGCATTTCCTGTCGCTGCCGCAGAAACCGACGGCTGCCGTCTGCTGGAACGATCTCGTTGCCATCGGCCTGATGAACGGCATCGCCCGCGCCGGCCTCGTGCCCGGCCGGGATATTTCGGTGACCGGTTACGACGATCTGGAGGAGGCGGCGATCGCCACGCCGGCGCTCACCACCGTCTGGAACGGCCAGGCCGAGGTGGGGCGGCTTGCGGCGCGGGCGCTGCTCGACAAGCTCATCGGCAGCCATGAGCCGGACGGCATCCACCTCATCAAGCCGGAGATGCGCATCCGCCAGTCCACCGGTCCCATCAGAAGTCGTTCGTAA
PROTEIN sequence
Length: 341
VAQKIKLSTIAETLGISTATVSLALRDSPLVATTTRDRIKEQARALGYIYNRRAASLRTSRSGIIGVVVHDIMNPFYGEILKAIESELDRSQHTFILSNHYDSVEKQRSFVETLLQLGGDGVIMSPAIGTPIEDMKLAEDNGMPAILVARSMEGVDMPTYRGDDSYGISLATNHLISLGHRTIAMIGGTDQTSTGRDRYQGYVNALRKAGMEVDPNLRIPGPRSKQGGFEAAVHFLSLPQKPTAAVCWNDLVAIGLMNGIARAGLVPGRDISVTGYDDLEEAAIATPALTTVWNGQAEVGRLAARALLDKLIGSHEPDGIHLIKPEMRIRQSTGPIRSRS*