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SCNpilot_expt_1000_bf_scaffold_2444_curated_29

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(27501..28010)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Rhizobium sp. CF142 RepID=J2L6K7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 69.6
  • Coverage: 171.0
  • Bit_score: 223
  • Evalue 1.20e-55
Transcriptional regulator {ECO:0000313|EMBL:EJJ29132.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.6
  • Coverage: 171.0
  • Bit_score: 223
  • Evalue 1.70e-55
MarR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 68.2
  • Coverage: 170.0
  • Bit_score: 220
  • Evalue 4.20e-55

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Taxonomy

Rhizobium sp. CF142 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 510
ATGGGCAAGAAGAAAGACGCCAAGAAGCACAAATCCGGCAAGAAAAAAGATCATCCGGAAGTCGGCGCGGCGGATCTGGCGCAGGCCATCACCCAGGCGGCGCGCTCCATGCGCACCACCTTGTCGCGCAATCTTCTCGAAGGCGGGCTTTATGCCGGCCAGGATGGGGTGATCGTGGCGCTGACCGAAGCGGACGGCCTGACCGCCGGCGCTTTGGCGCAACGCCTCGGCGTCAAGGCGCCGACCATGACGCGCGCCATCGGCCGCATGGAAGTCCAGGGTTTCGTCGAGCGCCGCCCCGATGAAACGGACCAGCGCCTGACCAAGGTCTATCTCACCGAGAACGGCCGGAGCAGCACCGAACTCATCGCCCGCGCCGTGACGGCGTGCGACGCGCTTGCCCTCAAGGGTTTTTCCGACAAGGAGGTCCGAACGCTGGTCCGGCTGCTCAAAACGCTGGATGCCAATCTTCAGGGAGAAGAGATCGTTGCCGAGGATGAGGAAGAGTAG
PROTEIN sequence
Length: 170
MGKKKDAKKHKSGKKKDHPEVGAADLAQAITQAARSMRTTLSRNLLEGGLYAGQDGVIVALTEADGLTAGALAQRLGVKAPTMTRAIGRMEVQGFVERRPDETDQRLTKVYLTENGRSSTELIARAVTACDALALKGFSDKEVRTLVRLLKTLDANLQGEEIVAEDEEE*