ggKbase home page

SCNpilot_expt_1000_bf_scaffold_3081_curated_7

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 5744..6823

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CEC707 related cluster n=1 Tax=unknown RepID=UPI0003CEC707 similarity UNIREF
DB: UNIREF100
  • Identity: 62.0
  • Coverage: 353.0
  • Bit_score: 423
  • Evalue 2.20e-115
Spermidine/putrescine ABC transporter {ECO:0000313|EMBL:ESX13942.1}; TaxID=1287322 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC265A00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.0
  • Coverage: 353.0
  • Bit_score: 423
  • Evalue 3.10e-115
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 60.1
  • Coverage: 356.0
  • Bit_score: 415
  • Evalue 2.40e-113

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium sp. LSJC265A00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1080
ATGGGGAAAAGACAGGGAGCCGCCGAGCTCACTGCGGTGGGAATCGGCAAGACCTTCGGTGACTTCCACGCCTTGCGCGACATTTCGCTGACCATCGGTTCCGGCGAATTCCTGACGCTGCTCGGGCCGTCCGGCTCGGGCAAGAGCACGTTCCTGATGATCCTCGCCGGCTTCGAGGAGGCCACCAGCGGCACCTTGAAGAAGGACGGTATCGACATCACCCGCGTGCCGGCGGAAAAACGCGCCTTCGGCATGGTCTTCCAGGGCTATGCCCTGTTTCCGCACATGACGGTCGAACAGAACATCGCCTTTCCGCTGCAGGTGCAGGGGCGGGCGCCCGGCGAGATCAAGATCCTCGTCGACGACATGATCGACCGCGTCGGCCTGCGCGGCCATGAAAAGAAGCGCCCCGCCGGCCTGTCCGGCGGCCAGCAGCAGCGTGTGGCGCTCGCCCGCGCCCTGGTGTTCGAACCGGCCGTGCTGCTGCTCGACGAGCCCTTTTCGGCACTCGACAAGAACCTGCGCGTCTCGATGCAGGAAGAGGTGCGCCGCCTGCACCAGGAACTCGGCACCACCTTCGTCTTCGTCACGCACGACCAGTCGGAAGCGCTGGCTTTGTCCACCCGCATCGGCATCTTCAACCACGGCCACCTGCAGCAGCTCGATACGCCGAAGCAGGTCTATGAACGTCCGGCCAACCGCTTCGTGGCGGAGTTCCTCGGCGACGTGAACATCCTGCCGCTCAGCGAGGCGCAGGCGACCGGCAATGGCGGCGAGGCGGTGTTCGAAGGCCGGCCGATCCGGCTGATCGCGCCGGGAGAGGCCGTGACCAAACAATTCGCCATCCGGCCGGAGCACATGGTGCTGTCGGAAAAGGCGCCCGACGACGGCAACATGCTGCAGGCGGAGATCGAGGGCGTTACCTATCTCGGTTCGGAAACGCGCTTTGCCCTGAAGACGCTGGGCGGCACGCCGATCGTGCTGCAGATGCCGACGCGGGAAGTGAGCGCCGGCTTCGAGCCGGGCCGCATGGTCTGGGCCGGCTGGCCGGCCACCCAGGGTTTCTTTGTCGGAAGCTGA
PROTEIN sequence
Length: 360
MGKRQGAAELTAVGIGKTFGDFHALRDISLTIGSGEFLTLLGPSGSGKSTFLMILAGFEEATSGTLKKDGIDITRVPAEKRAFGMVFQGYALFPHMTVEQNIAFPLQVQGRAPGEIKILVDDMIDRVGLRGHEKKRPAGLSGGQQQRVALARALVFEPAVLLLDEPFSALDKNLRVSMQEEVRRLHQELGTTFVFVTHDQSEALALSTRIGIFNHGHLQQLDTPKQVYERPANRFVAEFLGDVNILPLSEAQATGNGGEAVFEGRPIRLIAPGEAVTKQFAIRPEHMVLSEKAPDDGNMLQAEIEGVTYLGSETRFALKTLGGTPIVLQMPTREVSAGFEPGRMVWAGWPATQGFFVGS*