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SCNpilot_expt_1000_bf_scaffold_3081_curated_8

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: 6907..7974

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter, binding protein id=2776808 bin=GWF1_Rhodobacteraceae_65_7 species=Sinorhizobium medicae genus=Sinorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 77.3
  • Coverage: 352.0
  • Bit_score: 571
  • Evalue 6.40e-160
ABC transporter binding protein; K02055 putative spermidine/putrescine transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 75.5
  • Coverage: 351.0
  • Bit_score: 562
  • Evalue 1.20e-157
Tax=GWF1_Rhodobacteraceae_65_7_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 77.3
  • Coverage: 352.0
  • Bit_score: 571
  • Evalue 9.00e-160

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Taxonomy

GWF1_Rhodobacteraceae_65_7_curated → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1068
ATGACACACTTCAACCTGACCCGCCGCCGCTTTACCCAGATGGCGGCGCTGATGCTGACCACCAGCCCGATCGCGCTCAACGCCTCGCGCGCCTCGGCCGCCGAAGGCGAACTGGTGTTCGTCAACTGGGGCGGCGATGCCGGCACGGCCTACGACAAGGCCTATGGCGCGCCGTTCAAGGAAGAGGCGGGCATCACCGTCAAGCAGGACGGCTCCGGCCCGACGGAAGGCGCCATCGCCGCGCAGGTTGAGAGCGGCAAGCCGAGCTGGGACATCGTCGATGCCGACCCGTTCTCCGCCCAGGCGCTCGGCAAGAAAGGCCTGATCGAGCCGATCGACTACGCCATCGTCGACAAGGCGAAGATGCGCGAGGGTTTTGGCTGGGAATATGCCGCCTCCACCTATTTCTTCTCCTACATCATCGCCTACGACGCCTCGAAGTTCGGCGACAAGGTGCCGACCGGCATGGCGGATTTCTTCGATGTCGAGAAATTCCCGGGCAAGCGTTCGCTCTACAAGTGGGGCGCCGGCATGTGGGAAGCCGCACTTCTCGCCGATGGCGTCGAGCCCTCGAAGCTCTACCCGCTCGACCTGGAGCGCGCCCACAAGAAGATCGCCGCCTTCAAGGACAATGTCGTTTCCTATTGGGGCGGCGGTTCCGAAAGCCAGTCGGTTCTCCTGAACGGTGAAGCCTCGATGGCGCTGATCTGGTCGACCCGCGCCAGCCTGATCGAGAAGGATTCCGGCGGTTCGATCAAGTTCGTCTGGGACCAGGGCCTGATCTCGCCCGGCGCCATGGCCGTGCTGAAGGGCAATCCCGGCGGCAAGGATACGGCGATGAAGTTCATTGCCAGCGCCCAGGACCCGAAGAAGCAGGTCATCATGTTCGAAATGCTCGGCCAGGGCCCGGCCAACCCGGCCGCCGACGCGCTTCTGTCTCCCGAGCAGGCCCGCCTCAACCCGGTCGACCCGGCCAACATGTCGAAGCAGGTCGCCCTCGACATGGCCTGGTACGAGACCAATTACGGCCCGGCGCTGGACGAGTACACCAAGATCATCTCGGCCTGA
PROTEIN sequence
Length: 356
MTHFNLTRRRFTQMAALMLTTSPIALNASRASAAEGELVFVNWGGDAGTAYDKAYGAPFKEEAGITVKQDGSGPTEGAIAAQVESGKPSWDIVDADPFSAQALGKKGLIEPIDYAIVDKAKMREGFGWEYAASTYFFSYIIAYDASKFGDKVPTGMADFFDVEKFPGKRSLYKWGAGMWEAALLADGVEPSKLYPLDLERAHKKIAAFKDNVVSYWGGGSESQSVLLNGEASMALIWSTRASLIEKDSGGSIKFVWDQGLISPGAMAVLKGNPGGKDTAMKFIASAQDPKKQVIMFEMLGQGPANPAADALLSPEQARLNPVDPANMSKQVALDMAWYETNYGPALDEYTKIISA*