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SCNpilot_expt_1000_bf_scaffold_2009_curated_3

Organism: scnpilot_dereplicated_Rhizobium_2

partial RP 36 / 55 MC: 4 BSCG 36 / 51 MC: 5 ASCG 9 / 38 MC: 1
Location: comp(1643..1882)

Top 3 Functional Annotations

Value Algorithm Source
PAAR repeat-containing protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EEM6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 78.5
  • Coverage: 79.0
  • Bit_score: 142
  • Evalue 1.70e-31
Uncharacterized protein {ECO:0000313|EMBL:EYR83987.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.5
  • Coverage: 79.0
  • Bit_score: 142
  • Evalue 2.30e-31
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 77.2
  • Coverage: 79.0
  • Bit_score: 139
  • Evalue 5.80e-31

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 240
ATGATCGGCAACATGCCGGCGGCCCGGCTGAGCGATATGTCGGCACCTTGCGCACTTCCCGGCTGCGTTCCCGGCGGGCCGGGCATGATCACGCTGGGTTCGGCAACGGTGCTGATCGGCAATATGCCGGCCGCGCGGATCAACGACATGACCATGCATGCCGCCTGTATCGCTCCGATTCCGAGCCCGGTCGGCAAAATTCTGCCGCCCGGATGCCCCACCGTCATGATCGGTGGCTGA
PROTEIN sequence
Length: 80
MIGNMPAARLSDMSAPCALPGCVPGGPGMITLGSATVLIGNMPAARINDMTMHAACIAPIPSPVGKILPPGCPTVMIGG*