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SCNpilot_expt_1000_bf_scaffold_5851_curated

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5851_curated_1
unknown

Not on your lists

1..132
DNA (132bp) protein (44aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035C09F9
SCNpilot_expt_1000_bf_scaffold_5851_curated_2
unknown

Not on your lists

104..298
DNA (195bp) protein (65aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035C09F9
SCNpilot_expt_1000_bf_scaffold_5851_curated_3
unknown

Not on your lists

comp(382..621)
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000375B635
SCNpilot_expt_1000_bf_scaffold_5851_curated_4
unknown

Not on your lists

comp(713..1792)
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000375B635
SCNpilot_expt_1000_bf_scaffold_5851_curated_5
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1813..2892)
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035F4F86
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU59282.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_1000_bf_scaffold_5851_curated_6
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3283..4842)
DNA (1560bp) protein (520aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035F3C32
Uncharacterized protein {ECO:0000313|EMBL:KIA95186.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5851_curated_7
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7082..7789)
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000377D9EA
Uncharacterized protein {ECO:0000313|EMBL:KIA93440.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5851_curated_8
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7814..8998)
DNA (1185bp) protein (395aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000379E8FA
Uncharacterized protein {ECO:0000313|EMBL:CDS91738.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
RagB/SusD domain-containing protein
SCNpilot_expt_1000_bf_scaffold_5851_curated_9
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9429..10553)
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000378D13B
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EFK58108.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
TonB-dependent receptor plug
SCNpilot_expt_1000_bf_scaffold_5851_curated_10
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10510..12594)
DNA (2085bp) protein (695aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000378D13B
Membrane protein {ECO:0000313|EMBL:AIM35711.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
TonB-dependent receptor plug
SCNpilot_expt_1000_bf_scaffold_5851_curated_11
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12640..13677)
DNA (1038bp) protein (346aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035F832C
Uncharacterized protein {ECO:0000313|EMBL:KIA95256.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5851_curated_12
unknown

Not on your lists

comp(13688..14824)
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036BCFF8
SCNpilot_expt_1000_bf_scaffold_5851_curated_13
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14903..15880)
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000379514D
Uncharacterized protein {ECO:0000313|EMBL:ETZ23714.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
RagB/SusD domain-containing protein
SCNpilot_expt_1000_bf_scaffold_5851_curated_14
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16556..17116)
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036E9037
Membrane protein {ECO:0000313|EMBL:AIM35707.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
TonB-dependent receptor plug
SCNpilot_expt_1000_bf_scaffold_5851_curated_15
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17203..19368)
DNA (2166bp) protein (722aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036E9037
Uncharacterized protein {ECO:0000313|EMBL:KIA93494.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
TonB-dependent receptor plug
Displaying 15 items

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