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SCNpilot_cont_1000_p_scaffold_59_curated

Search features with annotation key words

Displaying items 1-30 of 190 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_59_curated_1
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(486..689)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7N7Q0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KHJ36720.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_59_curated_2
unknown

Not on your lists

comp(764..889)
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_59_curated_3
unknown

Not on your lists

comp(961..1728)
DNA (768bp) protein (256aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_59_curated_4
Flavobacterium sp. MEB061, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1936..2700)
DNA (765bp) protein (255aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1587524 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. MEB061.;"
methionine aminopeptidase; K01265 methionyl aminopeptidase [EC:3.4.11.18]
Methionine aminopeptidase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIU9_NIAKG
SCNpilot_cont_1000_p_scaffold_59_curated_5
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2733..3191)
DNA (459bp) protein (153aa)
Tax=RBG_13_Deltaproteobacteria_43_22_curated
SCNpilot_cont_1000_p_scaffold_59_curated_6
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3263..4147
DNA (885bp) protein (295aa)
carboxymethylenebutenolidase; K01061 carboxymethylenebutenolidase [EC:3.1.1.45]
Carboxymethylenebutenolidase {ECO:0000313|EMBL:ACU62004.1}; EC=3.1.1.45 {ECO:0000313|EMBL:ACU62004.1};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
dienelactone hydrolase n=1 Tax=Segetibacter koreensis RepID=UPI0003726BDE
SCNpilot_cont_1000_p_scaffold_59_curated_7
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4545..6992)
DNA (2448bp) protein (816aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JYX1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ELR72407.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
hypothetical protein; K02004 putative ABC transport system permease protein
SCNpilot_cont_1000_p_scaffold_59_curated_8
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7119..8759)
DNA (1641bp) protein (547aa)
Outer membrane protein/peptidoglycan-associated (Lipo)protein n=1 Tax=Saprospira grandis DSM 2844 RepID=J0NWY0_9SPHI
OmpA family protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_cont_1000_p_scaffold_59_curated_9
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8896..9285
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000371EF59
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU59045.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_59_curated_10
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

9282..10043
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EI77_RUNSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI51152.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
SCNpilot_cont_1000_p_scaffold_59_curated_11
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10106..10705
DNA (600bp) protein (200aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YDW3_9SPHI
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EHQ24303.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_cont_1000_p_scaffold_59_curated_12
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10761..11945
DNA (1185bp) protein (395aa)
Anti-FecI sigma factor, FecR n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PTL5_CHIPD
anti-FecI sigma factor FecR
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:ACU62772.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_59_curated_13
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12175..15666
DNA (3492bp) protein (1164aa)
TonB-linked outer membrane protein, SusC/RagA family n=2 Tax=Parabacteroides RepID=B7B5L4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:ETZ23577.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
TonB-dependent receptor plug
SCNpilot_cont_1000_p_scaffold_59_curated_14
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15686..17305
DNA (1620bp) protein (540aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5YJS5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN13992.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
RagB/SusD domain-containing protein
SCNpilot_cont_1000_p_scaffold_59_curated_15
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

17345..18628
DNA (1284bp) protein (428aa)
hypothetical protein n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B47FA2
Tax=RBG_16_Planctomycetes_55_9_curated
SCNpilot_cont_1000_p_scaffold_59_curated_16
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18654..20870
DNA (2217bp) protein (739aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC59486.1}; TaxID=1492737 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
hypothetical protein id=24414111 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=Alistipes indistinctus genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
glycoside hydrolase family 67
SCNpilot_cont_1000_p_scaffold_59_curated_17
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20926..23622
DNA (2697bp) protein (899aa)
id=3875726 bin=GWF2_Bacteroidetes_41_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_41_9 organism_group=Bacteroidetes
Tax=GWA2_Bacteroidetes_40_15_curated
SCNpilot_cont_1000_p_scaffold_59_curated_18
Bacteroidetes bacterium oral taxon 272, Bacteroidetes, Bacteria

Not on your lists

23634..25445
DNA (1812bp) protein (604aa)
Uncharacterized protein n=1 Tax=Bacteroidetes bacterium oral taxon 272 str. F0290 RepID=S8FB21_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EPT33196.1}; TaxID=888054 species="Bacteria; Bacteroidetes.;" source="Bacteroidetes bacterium oral taxon 272 str. F0290.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_59_curated_19
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

25458..26960
DNA (1503bp) protein (501aa)
Arylsulfatase A family protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DEB3_SINAD
Arylsulfatase A family protein {ECO:0000313|EMBL:GAL85053.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
arylsulfatase A family protein
SCNpilot_cont_1000_p_scaffold_59_curated_20
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27060..27911
DNA (852bp) protein (284aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XSZ3_PEDHD
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACU03554.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCNpilot_cont_1000_p_scaffold_59_curated_21
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27942..28790
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003621004
6-phosphogluconate dehydrogenase {ECO:0000313|EMBL:KIC93525.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
6-phosphogluconate dehydrogenase
SCNpilot_cont_1000_p_scaffold_59_curated_22
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(28783..29466)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QP82_SPILD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB39390.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_1000_p_scaffold_59_curated_23
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(29468..31087)
DNA (1620bp) protein (540aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037138E8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI50033.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
SCNpilot_cont_1000_p_scaffold_59_curated_24
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(31084..32283)
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EJ87_RUNSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI50032.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
SCNpilot_cont_1000_p_scaffold_59_curated_25
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32395..33291)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB78_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC92058.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_59_curated_26
Asticcacaulis sp. AC466, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33677..34966)
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC466 RepID=V4P7T2_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ83154.1}; TaxID=1282362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. AC466.;"
natural resistance-associated macrophage protein
SCNpilot_cont_1000_p_scaffold_59_curated_27
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

34985..35650
DNA (666bp) protein (222aa)
gpmA; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAJ4_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
SCNpilot_cont_1000_p_scaffold_59_curated_28
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35641..37242)
DNA (1602bp) protein (534aa)
Putative cysteine ligase BshC {ECO:0000256|HAMAP-Rule:MF_01867, ECO:0000256|SAAS:SAAS00275526}; EC=6.-.-.- {ECO:0000256|HAMAP-Rule:MF_01867, ECO:0000256|SAAS:SAAS00275528};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
UPF0747 protein Niako_2572 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPS9_NIAKG
hypothetical protein
SCNpilot_cont_1000_p_scaffold_59_curated_29
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(37313..38314)
DNA (1002bp) protein (334aa)
proline racemase; K12658 4-hydroxyproline epimerase [EC:5.1.1.8]
Proline racemase {ECO:0000313|EMBL:AEV98915.1}; EC=5.1.1.4 {ECO:0000313|EMBL:AEV98915.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Proline racemase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPT2_NIAKG
SCNpilot_cont_1000_p_scaffold_59_curated_30
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(38326..39807)
DNA (1482bp) protein (494aa)
aldehyde dehydrogenase; K14519 NADP-dependent aldehyde dehydrogenase [EC:1.2.1.4]
Aldehyde dehydrogenase (NADP(+)) {ECO:0000313|EMBL:AEV98916.1}; EC=1.2.1.4 {ECO:0000313|EMBL:AEV98916.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Aldehyde dehydrogenase (NADP(+)) n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPT3_NIAKG
Displaying items 1-30 of 190 in total

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