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SCNpilot_expt_500_bf_scaffold_5406_curated

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_5406_curated_1
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..228)
DNA (228bp) protein (76aa)
Putative secreted protein {ECO:0000313|EMBL:AJA09582.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
SCNpilot_expt_500_bf_scaffold_5406_curated_2
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(498..1406)
DNA (909bp) protein (303aa)
ABC transporter, periplasmic substrate-binding protein, putative n=3 Tax=Sphingomonadaceae RepID=Q1N8E7_9SPHN
ABC transporter, periplasmic substrate-binding protein, putative {ECO:0000313|EMBL:AJA09583.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
ABC transporter substrate-binding protein; K02067 putative ABC transport system substrate-binding protein
SCNpilot_expt_500_bf_scaffold_5406_curated_3
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1406..2173)
DNA (768bp) protein (256aa)
UPI0003D5E50A related cluster n=1 Tax=unknown RepID=UPI0003D5E50A
ABC transporter {ECO:0000313|EMBL:AJA09584.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
ABC transporter; K02065 putative ABC transport system ATP-binding protein
SCNpilot_expt_500_bf_scaffold_5406_curated_4
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2170..3270)
DNA (1101bp) protein (367aa)
ABC transporter permease n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C24B
ABC transporter permease {ECO:0000313|EMBL:AJA09585.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
hypothetical protein; K02066 putative ABC transport system permease protein
SCNpilot_expt_500_bf_scaffold_5406_curated_5
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3626..5089)
DNA (1464bp) protein (488aa)
Outer membrane component of tripartite multidrug resistance system n=1 Tax=alpha proteobacterium JLT2015 RepID=M2TIW4_9PROT
Putative outer membrane efflux protein OprN {ECO:0000313|EMBL:AJA09586.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
outer membrane efflux protein OprN precursor
SCNpilot_expt_500_bf_scaffold_5406_curated_6
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5097..5288)
DNA (192bp) protein (64aa)
Inner membrane component of tripartite multidrug resistance system n=1 Tax=alpha proteobacterium JLT2015 RepID=M2S7Q6_9PROT
Putative multidrug resistance transmembrane protein {ECO:0000313|EMBL:AJA09587.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
multidrug resistance transmembrane protein; K03446 MFS transporter, DHA2 family, multidrug resistance protein B
Displaying 6 items

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