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SCNpilot_expt_500_bf_scaffold_3148_curated

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_3148_curated_1
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1134
DNA (1134bp) protein (378aa)
CRP/FNR family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UXB4_9SPHN
CRP/FNR family transcriptional regulator {ECO:0000313|EMBL:ENY82894.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
CRP/FNR family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_3148_curated_2
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1151..1570)
DNA (420bp) protein (140aa)
TetR family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UWS1_9SPHN
TetR family transcriptional regulator {ECO:0000313|EMBL:ENY82895.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
TetR family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_3148_curated_3
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1927..2784
DNA (858bp) protein (286aa)
FF domain-containing protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WHF3_9SPHN
FF domain-containing protein {ECO:0000313|EMBL:ENY82896.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
FF domain-containing protein; K07044
SCNpilot_expt_500_bf_scaffold_3148_curated_4
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2781..3206
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W5R7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82897.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_3148_curated_5
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3239..4177)
DNA (939bp) protein (313aa)
HxlR family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WGS6_9SPHN
HxlR family transcriptional regulator {ECO:0000313|EMBL:ENY82898.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
HxlR family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_3148_curated_6
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4278..6563)
DNA (2286bp) protein (762aa)
TonB-dependent receptor n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UXC0_9SPHN
TonB-dependent receptor {ECO:0000313|EMBL:ENY82899.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
TonB-dependent receptor
SCNpilot_expt_500_bf_scaffold_3148_curated_7
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6688..7266
DNA (579bp) protein (193aa)
2-nitropropane dioxygenase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UWS5_9SPHN
2-nitropropane dioxygenase {ECO:0000313|EMBL:ENY82900.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
2-nitropropane dioxygenase
SCNpilot_expt_500_bf_scaffold_3148_curated_8
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7230..7619
DNA (390bp) protein (130aa)
2-nitropropane dioxygenase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UWS5_9SPHN
2-nitropropane dioxygenase {ECO:0000313|EMBL:ENY82900.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
2-nitropropane dioxygenase
SCNpilot_expt_500_bf_scaffold_3148_curated_9
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7616..9112
DNA (1497bp) protein (499aa)
Carotenoid oxygenase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WHF8_9SPHN
Carotenoid oxygenase {ECO:0000313|EMBL:ENY82901.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
carotenoid oxygenase; K11159 carotenoid cleavage dioxygenase
SCNpilot_expt_500_bf_scaffold_3148_curated_10
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9115..10806
DNA (1692bp) protein (564aa)
AMP-dependent synthetase and ligase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W5S2_9SPHN
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ENY82902.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
AMP-dependent synthetase and ligase
SCNpilot_expt_500_bf_scaffold_3148_curated_11
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10808..12037
DNA (1230bp) protein (410aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:ENY82903.1}; EC=2.3.1.9 {ECO:0000313|EMBL:ENY82903.1};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
acetyl-CoA acetyltransferase; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
Acetyl-CoA acetyltransferase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WGT1_9SPHN
SCNpilot_expt_500_bf_scaffold_3148_curated_12
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12039..13205
DNA (1167bp) protein (389aa)
Acetyl-CoA C-acyltransferase; K00632 acetyl-CoA acyltransferase [EC:2.3.1.16]
Acetyl-CoA C-acyltransferase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UXC4_9SPHN
Acetyl-CoA C-acyltransferase {ECO:0000313|EMBL:ENY82904.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_3148_curated_13
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13464..14498
DNA (1035bp) protein (345aa)
Beta-lactamase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UWT0_9SPHN
Beta-lactamase {ECO:0000313|EMBL:ENY82905.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
ampC; Beta-lactamase class C and other penicillin binding protein
SCNpilot_expt_500_bf_scaffold_3148_curated_14
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14495..15079
DNA (585bp) protein (195aa)
MarR family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WHG3_9SPHN
MarR family transcriptional regulator {ECO:0000313|EMBL:ENY82906.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
gcn5-related N-acetyltransferase
SCNpilot_expt_500_bf_scaffold_3148_curated_15
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15232..16164
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W5S7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82907.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein; K15270 S-adenosylmethionine uptake transporter
SCNpilot_expt_500_bf_scaffold_3148_curated_16
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16161..16793
DNA (633bp) protein (211aa)
Glutathione S-transferase-like protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WGT8_9SPHN
Glutathione S-transferase-like protein {ECO:0000313|EMBL:ENY82908.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
glutathione S-transferase-like protein
SCNpilot_expt_500_bf_scaffold_3148_curated_17
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16788..17981)
DNA (1194bp) protein (398aa)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UXD0_9SPHN
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:ENY82909.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
acyl-CoA dehydrogenase
SCNpilot_expt_500_bf_scaffold_3148_curated_18
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17993..18160)
DNA (168bp) protein (56aa)
long-chain-fatty-acid--CoA ligase; K00666 fatty-acyl-CoA synthase [EC:6.2.1.-]
Long-chain-fatty-acid--CoA ligase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UWT2_9SPHN
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:ENY82910.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
Displaying 18 items

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