ggKbase home page

SCNpilot_expt_500_bf_scaffold_7545_curated

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_7545_curated_1
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44..766
DNA (723bp) protein (241aa)
Phasin n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WAG0_9SPHN
Phasin {ECO:0000313|EMBL:ENY80446.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
phasin
SCNpilot_expt_500_bf_scaffold_7545_curated_2
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

976..1392
DNA (417bp) protein (139aa)
ATP-dependent Clp protease adaptor protein ClpS n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPR2_9SPHN
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
ATP-dependent Clp protease adaptor protein ClpS; K06891 ATP-dependent Clp protease adaptor protein ClpS
SCNpilot_expt_500_bf_scaffold_7545_curated_3
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1560..2054)
DNA (495bp) protein (165aa)
HxlR family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UQ15_9SPHN
HxlR family transcriptional regulator {ECO:0000313|EMBL:ENY80444.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
HxlR family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_7545_curated_4
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2167..2898
DNA (732bp) protein (244aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W9P0_9SPHN
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ENY80443.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_expt_500_bf_scaffold_7545_curated_5
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2892..3509
DNA (618bp) protein (206aa)
DSBA oxidoreductase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VYV8_9SPHN
DSBA oxidoreductase {ECO:0000313|EMBL:ENY80442.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
DSBA oxidoreductase
SCNpilot_expt_500_bf_scaffold_7545_curated_6
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3709..4311)
DNA (603bp) protein (201aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
GTP cyclohydrolase I; K01495 GTP cyclohydrolase I [EC:3.5.4.16]
GTP cyclohydrolase 1 n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GRU9_SPHAL
SCNpilot_expt_500_bf_scaffold_7545_curated_7
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4746..7394
DNA (2649bp) protein (883aa)
TonB-dependent receptor n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GRU8_SPHAL
TonB-dependent receptor
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
SCNpilot_expt_500_bf_scaffold_7545_curated_8
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7391..7672
DNA (282bp) protein (94aa)
TonB-dependent receptor n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W8Z7_9SPHN
TonB-dependent receptor
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
SCNpilot_expt_500_bf_scaffold_7545_curated_9
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7784..9346)
DNA (1563bp) protein (521aa)
TonB-dependent receptor n=1 Tax=Sphingomonas sp. LH128 RepID=J8VSS0_9SPHN
TonB-dependent receptor
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
Displaying 9 items

View Taxonomy