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SCNpilot_expt_500_bf_scaffold_1739_curated

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_1739_curated_1
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(31..1875)
DNA (1845bp) protein (615aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W1C6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81262.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1739_curated_2
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1876..3252)
DNA (1377bp) protein (459aa)
Two component, sigma54 specific, Fis family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WC03_9SPHN
Two component, sigma54 specific, Fis family transcriptional regulator {ECO:0000313|EMBL:ENY81263.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
two component, sigma54 specific, Fis family transcriptional regulator; K02481 two-component system, NtrC family, response regulator
SCNpilot_expt_500_bf_scaffold_1739_curated_3
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3249..5402)
DNA (2154bp) protein (718aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
Sensor signal transduction histidine kinase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9USI0_9SPHN
sensor signal transduction histidine kinase
SCNpilot_expt_500_bf_scaffold_1739_curated_4
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5405..6793)
DNA (1389bp) protein (463aa)
Undecaprenyl-phosphate galactosephosphotransferase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9US39_9SPHN
Undecaprenyl-phosphate galactosephosphotransferase {ECO:0000313|EMBL:ENY81265.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
undecaprenyl-phosphate galactosephosphotransferase
SCNpilot_expt_500_bf_scaffold_1739_curated_5
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6916..7953
DNA (1038bp) protein (346aa)
Mannose-6-phosphate isomerase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WCS6_9SPHN
Mannose-6-phosphate isomerase {ECO:0000313|EMBL:ENY81266.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
mannose-6-phosphate isomerase
SCNpilot_expt_500_bf_scaffold_1739_curated_6
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7950..9278)
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W1D1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81267.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
metal dependent phosphohydrolase
SCNpilot_expt_500_bf_scaffold_1739_curated_7
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9387..10742)
DNA (1356bp) protein (452aa)
XRE family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WC07_9SPHN
XRE family transcriptional regulator {ECO:0000313|EMBL:ENY81268.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
XRE family transcriptional regulator; K07110
SCNpilot_expt_500_bf_scaffold_1739_curated_8
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10870..12462
DNA (1593bp) protein (531aa)
Isocitrate lyase {ECO:0000313|EMBL:ENY81269.1}; EC=4.1.3.1 {ECO:0000313|EMBL:ENY81269.1};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
isocitrate lyase; K01637 isocitrate lyase [EC:4.1.3.1]
Isocitrate lyase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9USI4_9SPHN
SCNpilot_expt_500_bf_scaffold_1739_curated_9
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12671..12970
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9US43_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81270.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1739_curated_10
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13076..14062)
DNA (987bp) protein (329aa)
Integral membrane protein TerC n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WCT1_9SPHN
Integral membrane protein TerC {ECO:0000313|EMBL:ENY81271.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
integral membrane protein TerC; K05794 tellurite resistance protein TerC
SCNpilot_expt_500_bf_scaffold_1739_curated_11
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14132..14314)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W1D5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81272.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_1739_curated_12
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14527..15351)
DNA (825bp) protein (275aa)
LuxR family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WC11_9SPHN
LuxR family transcriptional regulator {ECO:0000313|EMBL:ENY81273.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
LuxR family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_1739_curated_13
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15483..16796)
DNA (1314bp) protein (438aa)
peptidase M20D, amidohydrolase; K01451 hippurate hydrolase [EC:3.5.1.32]
Peptidase M20D, amidohydrolase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9USI8_9SPHN
Peptidase M20D, amidohydrolase {ECO:0000313|EMBL:ENY81274.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_1739_curated_14
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16841..17485)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9US46_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81275.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1739_curated_15
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18395..18901)
DNA (507bp) protein (169aa)
Patatin n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W1D8_9SPHN
Patatin {ECO:0000313|EMBL:ENY81277.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
patatin; K07001 NTE family protein
SCNpilot_expt_500_bf_scaffold_1739_curated_16
unknown

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19192..19440
DNA (249bp) protein (83aa)

This feature has no annotations

Displaying 16 items

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