ggKbase home page

SCNpilot_expt_500_bf_scaffold_3469_curated

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_3469_curated_1
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..167)
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UVJ9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82299.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_3469_curated_2
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(179..1084)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UV21_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82300.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_3469_curated_3
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1269..3458)
DNA (2190bp) protein (730aa)
peptidyl-dipeptidase Dcp; K01284 peptidyl-dipeptidase Dcp [EC:3.4.15.5]
Peptidyl-dipeptidase Dcp n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WFU4_9SPHN
Peptidyl-dipeptidase Dcp {ECO:0000313|EMBL:ENY82301.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_3469_curated_4
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3644..3964)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W442_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82302.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_3469_curated_5
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4052..4921)
DNA (870bp) protein (290aa)
Senescence marker protein-30 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WF05_9SPHN
Senescence marker protein-30 {ECO:0000313|EMBL:ENY82303.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
senescence marker protein-30
SCNpilot_expt_500_bf_scaffold_3469_curated_6
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5267..6421
DNA (1155bp) protein (385aa)
Long-chain acyl-CoA dehydrogenase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UVK3_9SPHN
Long-chain acyl-CoA dehydrogenase {ECO:0000313|EMBL:ENY82304.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
acyl-CoA dehydrogenase-like protein
SCNpilot_expt_500_bf_scaffold_3469_curated_7
unknown

Not on your lists

comp(6572..6868)
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00035EE59E
SCNpilot_expt_500_bf_scaffold_3469_curated_8
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7200..7604
DNA (405bp) protein (135aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:ENY82305.1}; EC=2.3.1.9 {ECO:0000313|EMBL:ENY82305.1};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
acetyl-CoA acetyltransferase; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
Acetyl-CoA acetyltransferase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UV25_9SPHN
SCNpilot_expt_500_bf_scaffold_3469_curated_9
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7968..8504
DNA (537bp) protein (179aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WFU8_9SPHN
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ENY82306.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_expt_500_bf_scaffold_3469_curated_10
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8506..8943
DNA (438bp) protein (146aa)
thioesterase superfamily protein; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-]
Thioesterase superfamily protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W446_9SPHN
Thioesterase superfamily protein {ECO:0000313|EMBL:ENY82307.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_3469_curated_11
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9081..9593)
DNA (513bp) protein (171aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
gmk; guanylate kinase; K00942 guanylate kinase [EC:2.7.4.8]
Guanylate kinase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WF10_9SPHN
Displaying 11 items

View Taxonomy