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SCNpilot_expt_500_bf_scaffold_2886_curated_19

Organism: scnpilot_dereplicated_Sphingopyxis_1

near complete RP 50 / 55 BSCG 49 / 51 ASCG 10 / 38
Location: 16200..16469

Top 3 Functional Annotations

Value Algorithm Source
NADH-quinone oxidoreductase subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01357};; NADH dehydrogenase I subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; NDH-1 subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 89.0
  • Bit_score: 172
  • Evalue 2.40e-40
NADH (or F420H2) dehydrogenase subunit C; K00332 NADH-quinone oxidoreductase subunit C [EC:1.6.5.3] similarity KEGG
DB: KEGG
  • Identity: 68.9
  • Coverage: 90.0
  • Bit_score: 119
  • Evalue 5.30e-25
NADH-quinone oxidoreductase subunit C n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UNS5_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 89.0
  • Bit_score: 172
  • Evalue 1.70e-40

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 270
ATGACCGCAGAGGCAGTCAAGAAGGCGGACGAGGCGAAGAAGGCACCGCCGCCGACGCCCAAGACGACCGACAACGGCAAGCAGACCGGCGCGGGCGACAAGGCGAATAAGGAAGCCGCGAAGCCCAGCAAAGACAGTGCCAAGGCCAAGCCTGCTGCAAAGGCGAAGACGCCCGCGACCAAGAAGGCTGAAAAGGCTCCGGCAAAGCCCAAGGCGGCCGCCAAGGCTCCGGCCAAGCCGCGCGAGCCCAAAGCAGGAGGTGACGCATGA
PROTEIN sequence
Length: 90
MTAEAVKKADEAKKAPPPTPKTTDNGKQTGAGDKANKEAAKPSKDSAKAKPAAKAKTPATKKAEKAPAKPKAAAKAPAKPREPKAGGDA*