ggKbase home page

SCNpilot_expt_500_bf_scaffold_2886_curated_20

Organism: scnpilot_dereplicated_Sphingopyxis_1

near complete RP 50 / 55 BSCG 49 / 51 ASCG 10 / 38
Location: 16466..17722

Top 3 Functional Annotations

Value Algorithm Source
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 418.0
  • Bit_score: 858
  • Evalue 3.30e-246
NADH dehydrogenase subunit D; K00333 NADH-quinone oxidoreductase subunit D [EC:1.6.5.3] similarity KEGG
DB: KEGG
  • Identity: 94.0
  • Coverage: 418.0
  • Bit_score: 818
  • Evalue 1.10e-234
NADH-quinone oxidoreductase subunit D n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W9G5_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 418.0
  • Bit_score: 858
  • Evalue 2.40e-246

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1257
ATGACCGATAATGCGACGGTCCGGCACCACGGAAGCGACATGTTCGAAGGCTATCCGGTCGATACCGCCGATACGGCGGGCGATCAGGTCGTCACCAATTACACGATCAACTTCGGTCCGCAGCACCCCGCGGCGCACGGCGTGCTGCGCATGGTGATGGAACTCGACGGCGAGATTATCGAACGCGTCGATCCGCATGTCGGGCTGCTCCATCGCGGCACCGAAAAGCTGATCGAGTATAAGACCTATCTGCAGGCTTTGCCCTATTTCGACCGGCTCGACTATTGCTCGCCGCTCGGCATGGAGCATAGCTATGTGCTGGCGATCGAGAAGCTGCTCGATCTCGAAGTGCCCGAACGCGCGCAATATCTGCGCGTCCTGTTCGCCGAGCTGACGCGCATCTGCAATCATATGCTCAACATCGGGTCGCACGTCATGGACGTCGGCGCGATGACGCCGAACCTGTGGGTGTTCGAACTGCGCGAGGACTGCCTCAACTTCTTCGAACGCGCGAGCGGCGCGCGGATGCATTCGGCCTGGTTCCGTCCCGGCGGCGTCCATCAGGACGTTCCCGAAAAACTGCTCGTCGACATCGGCGAATGGGTCGATAAACGCCTGCCCGAACTGTTCGGCGATGCGATGAGCCTCGTCATCGACAACCGCATCTTCAAACAGCGCAACGTCGATATCGCCGTGGTCAGCAAGGAAGACGCGCTGGCCTGGGGATTCTCGGGCCCGATGATCCGCGGCAGCGGCATTCCCTGGGACATCCGCAAGAGCCAGCCCTACGACGCTTATGCCAAGATGGATTTCGACATTCCCGTGGGGACCAAGGGCGACTGCTACGACCGCTTCATGGTCCGCGTGCAGGAAGTCTATCAGTCGGCGCGCATCATCAAGCAGTGCCTGCGCGATATGCCGAGCGGCCCGGTCGCCAGCCTCGACCGCAAGGTTTCGCCGCCCAAGCGTGGCGAGATGAAGCAGTCGATGGAATCGCTGATCCACCACTTCAAGCTCTATACCGAGGGCTTCCACGTCCCGGCGGGCGAGGTTTACGTGGCGACCGAAAGCCCCAAGGGCGAGTTCGGCGTTTATCTGGTCAGCGATGGCACCAACAAGCCGTACCGCTGCAAGATCCGCCCGACGGCGTTTTCGCACCTTCAGGCGATGGATTTCATGTGCAAGGGCCACATGCTCGCCGACACCACTGCAATTATCGGCGCCATTGACGTCGTTTTCGGAGAGTGTGACCGCTGA
PROTEIN sequence
Length: 419
MTDNATVRHHGSDMFEGYPVDTADTAGDQVVTNYTINFGPQHPAAHGVLRMVMELDGEIIERVDPHVGLLHRGTEKLIEYKTYLQALPYFDRLDYCSPLGMEHSYVLAIEKLLDLEVPERAQYLRVLFAELTRICNHMLNIGSHVMDVGAMTPNLWVFELREDCLNFFERASGARMHSAWFRPGGVHQDVPEKLLVDIGEWVDKRLPELFGDAMSLVIDNRIFKQRNVDIAVVSKEDALAWGFSGPMIRGSGIPWDIRKSQPYDAYAKMDFDIPVGTKGDCYDRFMVRVQEVYQSARIIKQCLRDMPSGPVASLDRKVSPPKRGEMKQSMESLIHHFKLYTEGFHVPAGEVYVATESPKGEFGVYLVSDGTNKPYRCKIRPTAFSHLQAMDFMCKGHMLADTTAIIGAIDVVFGECDR*