ggKbase home page

SCNpilot_expt_500_bf_scaffold_1540_curated_30

Organism: scnpilot_dereplicated_Sphingopyxis_1

near complete RP 50 / 55 BSCG 49 / 51 ASCG 10 / 38
Location: 25926..26414

Top 3 Functional Annotations

Value Algorithm Source
peptidase A24A, prepilin type IV; K02278 prepilin peptidase CpaA [EC:3.4.23.43] similarity KEGG
DB: KEGG
  • Identity: 70.6
  • Coverage: 160.0
  • Bit_score: 235
  • Evalue 9.20e-60
Peptidase A24A, prepilin type IV n=1 Tax=Sphingopyxis sp. MC1 RepID=N9USC9_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 97.5
  • Coverage: 162.0
  • Bit_score: 314
  • Evalue 5.00e-83
Peptidase A24A, prepilin type IV {ECO:0000313|EMBL:ENY81375.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.5
  • Coverage: 162.0
  • Bit_score: 314
  • Evalue 7.00e-83

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 489
ATGGACCAGAAAATCATCGCCTTGGGCCTGATGGGGCTGCTCGCCATGTTGATGATCGCCGCGGCGGTCAGCGATCTGCGCTCGCGCACCATCTCGAACGGCCTCAATGCGGCCATTGCCCTCTTCGCTATCCCCTTCTGGATCGTGTCGGACATGGCTTTCTGGCCCGACATGCCGATGCAGTTCGGCGCCGCCTTTGCGGTCTTCGCGGTGTTCGCCGGTCTCTTCGCCCTGGGGGCGATGGGCGGCGGCGACGTGAAGATGATCGGCGCCGTGATGCTCTGGATTCCGCTTTATTTGTACTTTCCCATGCTGACCATCATGGCGATCGGGGGCGGAATCCTGTCGGCTGTGATGCTGATTCAGTCCAAAATTCGTCCTTCGGACAAGGCGATAGAGGTTCCCTACGGGCTCGCGATCGCCGCCGGGGGCCTTTGGGCGGTTCACCAACACTATCTTAACCAGTTTCAGTTTATCGGATCGACCTGA
PROTEIN sequence
Length: 163
MDQKIIALGLMGLLAMLMIAAAVSDLRSRTISNGLNAAIALFAIPFWIVSDMAFWPDMPMQFGAAFAVFAVFAGLFALGAMGGGDVKMIGAVMLWIPLYLYFPMLTIMAIGGGILSAVMLIQSKIRPSDKAIEVPYGLAIAAGGLWAVHQHYLNQFQFIGST*