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SCNpilot_expt_500_bf_scaffold_1241_curated_28

Organism: scnpilot_dereplicated_Sphingopyxis_1

near complete RP 50 / 55 BSCG 49 / 51 ASCG 10 / 38
Location: comp(30225..31271)

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 348.0
  • Bit_score: 667
  • Evalue 1.20e-188
3-isopropylmalate dehydrogenase; K00052 3-isopropylmalate dehydrogenase [EC:1.1.1.85] similarity KEGG
DB: KEGG
  • Identity: 91.4
  • Coverage: 348.0
  • Bit_score: 622
  • Evalue 7.50e-176
3-isopropylmalate dehydrogenase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9URZ5_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 348.0
  • Bit_score: 667
  • Evalue 8.40e-189

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1047
GTGCAAATCCTGCTGCTGGCTGGCGACGGTATCGGACCGGAGATCATGGTCGAGGCCGAAAAGACCCTCGCCGCGCTGGCGTTGCCCATCACGATCGACCGCGCGCTTGTCGGCGGTGCGGCCTATGCCGCCAGCGGCCACCCGCTGCCGCCCGAGACGCTCGCAAAGGCCAAGGCGGCCGATGCGATCCTGTTCGGTGCGGTCGGCGATCCGCGCTTCGATGCTGTCGAGCGTCATTTGCGGCCCGAGCAGGCTATTCTCGGCCTCCGGTCGGAACTCGGCCTGTTCGCCAATCTTCGTCCGGCCAAGCTGTTCGCGGGACTGGAAGACAGCTCTGCGCTACGGCCCGAAGTCGCCTCGGCGATTGACCTGCTGATCGTGCGCGAACTCAACGGCGACGTCTATTTCGGCGAAAAGGGCATGCGCACGACCGCGACCGGGGAGCGCGAAGGCTATGACATCATGGCGTATAGCGAGAGCGAGGTGCGGCGTATCGCGCATGTCGCGTTCCGCGCCGCGCAAGGGCGCCGGAAGCGGCTGTGCTCGGTCGACAAGGCGAACGTCCTCGAAACATCGCAGCTGTGGCGGGACGTCGTGATCGAGGTCGCGGCCGACTATCCCGACGTCGAGCTCAGTCATATGTATGTCGACAATGCCGCGATGCAGTTGGTGCGCAATCCGGGGCAGTTCGACGTGGTCGTCACGGGCAATCTGTTCGGCGACATTTTGTCCGATCAGGCATCGATGTGCGTCGGCTCGATCGGTCTTCTCGCATCGGCGTCGCTGAGCGAAGGCCGCCAGGGGCTGTACGAGCCCATTCACGGCAGCGCCCCCGATATTGCGGGTAAAGGGATAGCCAATCCGCTCGCGATGATCCTGTCGCTTGCGATGCTGCTTCGCCATTCGGGCGGCGACGAAGCGAGCGCGGCGCGCATCGAGAGTGCGGTAGCGAAAATCCTTGCCGACGGATGCCGCGGCGCCGATTTGGGCGGATCGATGGGCACCGCAGCGCTTGGCGATGCGGTTGTCGCGGCTTTGAACGGATAA
PROTEIN sequence
Length: 349
VQILLLAGDGIGPEIMVEAEKTLAALALPITIDRALVGGAAYAASGHPLPPETLAKAKAADAILFGAVGDPRFDAVERHLRPEQAILGLRSELGLFANLRPAKLFAGLEDSSALRPEVASAIDLLIVRELNGDVYFGEKGMRTTATGEREGYDIMAYSESEVRRIAHVAFRAAQGRRKRLCSVDKANVLETSQLWRDVVIEVAADYPDVELSHMYVDNAAMQLVRNPGQFDVVVTGNLFGDILSDQASMCVGSIGLLASASLSEGRQGLYEPIHGSAPDIAGKGIANPLAMILSLAMLLRHSGGDEASAARIESAVAKILADGCRGADLGGSMGTAALGDAVVAALNG*