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SCNpilot_expt_500_bf_scaffold_1329_curated_18

Organism: scnpilot_dereplicated_Sphingopyxis_1

near complete RP 50 / 55 BSCG 49 / 51 ASCG 10 / 38
Location: comp(18268..19698)

Top 3 Functional Annotations

Value Algorithm Source
RND efflux system, outer membrane lipoprotein, NodT n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UVI6_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 98.3
  • Coverage: 476.0
  • Bit_score: 886
  • Evalue 1.60e-254
RND efflux system, outer membrane lipoprotein, NodT {ECO:0000313|EMBL:ENY82284.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.3
  • Coverage: 476.0
  • Bit_score: 886
  • Evalue 2.20e-254
RND efflux system, outer membrane lipoprotein, NodT similarity KEGG
DB: KEGG
  • Identity: 77.1
  • Coverage: 475.0
  • Bit_score: 708
  • Evalue 1.10e-201

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1431
ATGCCCCGATCATTTTTCCTCTATACCGCGGTTTTCTGCCTGTTGGCGGGTTGTGCCAGCGTTCCCGATCTCGGGCAGAAGCCCGCGCCGGCCGCCGCCGCGGCGCTCGATTCGCAAGCAACTCTTGCCGATCAGGCGGGGGCCTGGCCGGTCGAGGGGTGGTGGCAGGGCTTCGGCGACCCGCAGCTCGATGCGCTGATCGACGAAGGGCTGGCGGGATCGCCCGACATCGCGGTGGCGGCAGCGCGGGTGCGCGCCGCCGAGGCACTGGCACAGCAGGCGGGGGCGGCGCTGCTCCCGCACGTCGGCGTTCAGGGCAGCGCCGGCGGCGTCCAGCAAAGCAAGAATATGGGAATTCCGCCCGCTTTCGTTCCCGACGGCATTCAGGATACCGGCAGCATCGCCGCAACCTTCGGCTTCGATCTCGACTTGTGGGGCAAGAACCGCGCAGCGCTGGCGGCGGCCACGTCCGAAGCCGAAGCGGCGCGCGTCGATGCTGCGCAGGCGCGGCTGATGCTGACGACCGGGATTGCCACCGCTTACGCCGATCTGGCGGGCTATTATGCCGATCTCGACGTTGCGCAGGACGCGATCCGTATCCGCGGCGCGAGCGCCGATCTGTCGGCGAAGCGCACCGCCGCCGGGCTCGACAATCAGGCGACGCAGCGGCAGGCCGAAAGCCGTGCCGCCTCGGCGCGCGGCGATGTCGCCGCGATCGAGGAGGCGATCGCGCTCACCCGCAACCGCCTTGCGGCCCTGCTCGGCGCCGGACCCGATCGCGGCCGGACCATCGCGCGTCCGGCGCTTGCGGCGCCGTCGCTCGCGCTGCCGCCGCAGGCGGGGATCGACCTGGTCGGCCGCCGGCCCGACATTGTCGCGGCCCGGCTGCGGGCCGAGGCGGCGGCGAAGCGCATCGACGTGGCGCGTGCCGCCTTTTATCCGAACATCAACCTGTCGGCGCTCGTCGGGCTCCAGTCGCTCGGGCTGTCGAACCTGTTCAAGACCGGGTCCGAATATGGCAATGGCGGCGCGGCGATCAGCCTGCCGATCTTCGAGGGCGGGCGGCTGCAGGGCCAGTATCGCGGGGCGCGGGCCGATTATGACGGCGCCGTCGCCAATTACGACCGCACGCTCGTCGCCGCGCTGCGCGATGTCGCCGACATCGTCGCCAGCCGTGACGCCATAGCGCGCCAGCTTGCCGACCGGCGCGACGCGCTGAAGGCCGCGGCCGACGCCGCCAACCTTGCCGGGCTGCGCTACCGTGCCGGCCTTTCCAACCAGCTTGCGCAGCTCACCGCCGAGGATAGCCAGGTCGCGCTCGCGCGCGCGGTCGCCGACCTCGAAGCGCGCCGGCTTTCGCTCGACATTGCCCTGATCCGCGCCCTGGGCGGCGGATTTGCGGCCGCATCGCCAACAGGAGACAAGCAATGA
PROTEIN sequence
Length: 477
MPRSFFLYTAVFCLLAGCASVPDLGQKPAPAAAAALDSQATLADQAGAWPVEGWWQGFGDPQLDALIDEGLAGSPDIAVAAARVRAAEALAQQAGAALLPHVGVQGSAGGVQQSKNMGIPPAFVPDGIQDTGSIAATFGFDLDLWGKNRAALAAATSEAEAARVDAAQARLMLTTGIATAYADLAGYYADLDVAQDAIRIRGASADLSAKRTAAGLDNQATQRQAESRAASARGDVAAIEEAIALTRNRLAALLGAGPDRGRTIARPALAAPSLALPPQAGIDLVGRRPDIVAARLRAEAAAKRIDVARAAFYPNINLSALVGLQSLGLSNLFKTGSEYGNGGAAISLPIFEGGRLQGQYRGARADYDGAVANYDRTLVAALRDVADIVASRDAIARQLADRRDALKAAADAANLAGLRYRAGLSNQLAQLTAEDSQVALARAVADLEARRLSLDIALIRALGGGFAAASPTGDKQ*