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SCNpilot_expt_500_bf_scaffold_1329_curated

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_1329_curated_1
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..662
DNA (660bp) protein (220aa)
Alpha/beta hydrolase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WF00_9SPHN
Alpha/beta hydrolase {ECO:0000313|EMBL:ENY82298.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hydrolase; K06889
SCNpilot_expt_500_bf_scaffold_1329_curated_2
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

836..1126
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W436_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82297.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1329_curated_3
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1224..1892
DNA (669bp) protein (223aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
ribulose-phosphate 3-epimerase; K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1]
Ribulose-phosphate 3-epimerase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WFU0_9SPHN
SCNpilot_expt_500_bf_scaffold_1329_curated_4
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1896..3674
DNA (1779bp) protein (593aa)
Heparinase II/III-like protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UV18_9SPHN
Heparinase II/III-like protein {ECO:0000313|EMBL:ENY82295.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
heparinase II/III-like protein
SCNpilot_expt_500_bf_scaffold_1329_curated_5
unknown

Not on your lists

comp(3826..4959)
DNA (1134bp) protein (378aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1329_curated_6
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5530..6675
DNA (1146bp) protein (382aa)
TonB-dependent receptor n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UVJ5_9SPHN
TonB-dependent receptor {ECO:0000313|EMBL:ENY82294.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
TonB-dependent receptor
SCNpilot_expt_500_bf_scaffold_1329_curated_7
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6690..8123
DNA (1434bp) protein (478aa)
Putative hydrolase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WEZ7_9SPHN
Putative hydrolase {ECO:0000313|EMBL:ENY82293.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
putative hydrolase
SCNpilot_expt_500_bf_scaffold_1329_curated_8
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8160..9191
DNA (1032bp) protein (344aa)
3-phytase; K01083 3-phytase [EC:3.1.3.8]
3-phytase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W433_9SPHN
3-phytase {ECO:0000313|EMBL:ENY82292.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_1329_curated_9
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9297..10889
DNA (1593bp) protein (531aa)
purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
Bifunctional purine biosynthesis protein PurH n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WFT4_9SPHN
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_1329_curated_10
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11027..11704
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UV12_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82290.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
DedA-family protein
SCNpilot_expt_500_bf_scaffold_1329_curated_11
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11834..12379)
DNA (546bp) protein (182aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UVJ0_9SPHN
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ENY82289.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
glyoxalase/bleomycin resistance protein/dioxygenase
SCNpilot_expt_500_bf_scaffold_1329_curated_12
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12376..12852)
DNA (477bp) protein (159aa)
4-hydroxyphenylpyruvate dioxygenase; K00457 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WEZ3_9SPHN
4-hydroxyphenylpyruvate dioxygenase {ECO:0000313|EMBL:ENY82288.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_1329_curated_13
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13680..15566)
DNA (1887bp) protein (629aa)
ABC transporter n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W428_9SPHN
ABC transporter {ECO:0000313|EMBL:ENY82287.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
ABC transporter; K06158 ATP-binding cassette, subfamily F, member 3
SCNpilot_expt_500_bf_scaffold_1329_curated_14
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15615..16136)
DNA (522bp) protein (174aa)
EmrB/QacA family drug resistance transporter n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WFT1_9SPHN
EmrB/QacA family drug resistance transporter {ECO:0000313|EMBL:ENY82286.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
EmrB/QacA family drug resistance transporter; K03446 MFS transporter, DHA2 family, multidrug resistance protein B
SCNpilot_expt_500_bf_scaffold_1329_curated_15
unknown

Not on your lists

16258..16440
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1329_curated_16
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16468..16917
DNA (450bp) protein (150aa)
Uncharacterised protein {ECO:0000313|EMBL:CRE23898.1}; TaxID=520 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis.;"
SCNpilot_expt_500_bf_scaffold_1329_curated_17
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17129..17746)
DNA (618bp) protein (206aa)
Secretion protein HlyD n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UV09_9SPHN
Secretion protein HlyD {ECO:0000313|EMBL:ENY82285.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
secretion protein HlyD; K03543 multidrug resistance protein A
SCNpilot_expt_500_bf_scaffold_1329_curated_18
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18268..19698)
DNA (1431bp) protein (477aa)
RND efflux system, outer membrane lipoprotein, NodT n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UVI6_9SPHN
RND efflux system, outer membrane lipoprotein, NodT {ECO:0000313|EMBL:ENY82284.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
RND efflux system, outer membrane lipoprotein, NodT
SCNpilot_expt_500_bf_scaffold_1329_curated_19
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19752..20402
DNA (651bp) protein (217aa)
TetR family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WEY8_9SPHN
TetR family transcriptional regulator {ECO:0000313|EMBL:ENY82283.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
TetR family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_1329_curated_20
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20482..20664
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W425_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82282.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_1329_curated_21
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20681..21568)
DNA (888bp) protein (296aa)
Helix-turn-helix domain-containing protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WFS6_9SPHN
Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:ENY82281.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
helix-turn-helix domain-containing protein
SCNpilot_expt_500_bf_scaffold_1329_curated_22
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22026..22553
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UV05_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82280.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1329_curated_23
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22699..23451
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UVI3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82279.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1329_curated_24
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24099..24290
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WEY6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82278.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1329_curated_25
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24822..26846
DNA (2025bp) protein (675aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W420_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82277.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein; K07347 outer membrane usher protein
SCNpilot_expt_500_bf_scaffold_1329_curated_26
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26856..27764
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WFS3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82276.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1329_curated_27
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27903..28316
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UV01_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82275.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1329_curated_28
unknown

Not on your lists

comp(28303..28392)
DNA (90bp) protein (30aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_1329_curated_29
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28612..28866)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UVH8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82274.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_1329_curated_30
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28967..29758)
DNA (792bp) protein (264aa)
Sterol desaturase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WEY2_9SPHN
Sterol desaturase {ECO:0000313|EMBL:ENY82273.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
sterol desaturase
Displaying items 1-30 of 35 in total

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