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SCNpilot_expt_500_bf_scaffold_1329_curated_21

Organism: scnpilot_dereplicated_Sphingopyxis_1

near complete RP 50 / 55 BSCG 49 / 51 ASCG 10 / 38
Location: comp(20681..21568)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain-containing protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WFS6_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 97.9
  • Coverage: 240.0
  • Bit_score: 450
  • Evalue 1.40e-123
Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:ENY82281.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.9
  • Coverage: 240.0
  • Bit_score: 450
  • Evalue 1.90e-123
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 41.7
  • Coverage: 254.0
  • Bit_score: 181
  • Evalue 3.70e-43

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 888
ATGTCCAGCCTGCCCCGGCGCGCGTCCGCGCCCCGAAACCCCGCGGGACCGTCCGCCGGCCTCTTCGCCCATGTGCTCGGCTCGCCCCGGTTGCCGCACGAATCGGATGAGACGAGCGTGCGCATTAACCCCTCGCTTACCCTGCGCTGCGACAAGCAGCCGCCTATGGTCATTCACGGAACGATGGTTGAGCCCCCCGCGGGCGAAGGGCAGCAGCGGGCGGATCGCCTGCGGCTCAATCTTGCGGTCGAGGGCGCGGTGGCGCCCGGTCAGGGCACCGAGGTCATCGTCCACAATCTGTCGGTCAGCGGCGTGTTGATCGAAACTGCCGCCGATCTGATGATGGGGCAGGATATAACGATCGCCTTGCCCGAGGCCGGCGATGTCGTCGCCGCGGTCGTATGGCAGAGCGAGCGGCTTTATGGCTGTCGCTTTCGCCAGCCGCTGCCGCGCGCTGCGCTCAGCGCGGCGCGGCTGCGCAATCCGCTCCCGTCCGATTTCGATCCTGCCGACCGGGCCGAGGCCGACACCGATGCCGATGCGGAGGAGACACTCGGCGCGCGGTTGCGGCGGCTACGACAGGCGCGCGGGCTGAGCCTCGCGGGGCTCGCCCAGGCGGCGGGTCTCAGCAAACCGAGCATCTGGGCGTGGGAAAATGGTACCACCGCGCCGCGCCGCACGAGCCTGCTTGCGCTGGCGCGTGCACTCGATGTTCCCGAACAGCAGCTGAGCGGCGTCGCCGCGATGGTCGGCCTGCGCGCCTCGGCGCGCGCCGAGGCGGATGCCGAAAGCGACATGCTGAAAGTCGAGATAGCCGCGGCGCGCCGTCGCATCGCGCTCGCCGCGGGTGTCGATGCCGCCAGCGTGCGGATCATGATCGAATTGTAA
PROTEIN sequence
Length: 296
MSSLPRRASAPRNPAGPSAGLFAHVLGSPRLPHESDETSVRINPSLTLRCDKQPPMVIHGTMVEPPAGEGQQRADRLRLNLAVEGAVAPGQGTEVIVHNLSVSGVLIETAADLMMGQDITIALPEAGDVVAAVVWQSERLYGCRFRQPLPRAALSAARLRNPLPSDFDPADRAEADTDADAEETLGARLRRLRQARGLSLAGLAQAAGLSKPSIWAWENGTTAPRRTSLLALARALDVPEQQLSGVAAMVGLRASARAEADAESDMLKVEIAAARRRIALAAGVDAASVRIMIEL*