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SCNpilot_expt_500_bf_scaffold_547_curated_2

Organism: scnpilot_dereplicated_Sphingopyxis_1

near complete RP 50 / 55 BSCG 49 / 51 ASCG 10 / 38
Location: 223..930

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S3 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WFF4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 235.0
  • Bit_score: 468
  • Evalue 3.90e-129
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 235.0
  • Bit_score: 468
  • Evalue 5.40e-129
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 similarity KEGG
DB: KEGG
  • Identity: 96.2
  • Coverage: 235.0
  • Bit_score: 456
  • Evalue 6.30e-126

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 708
ATGGGCCAGAAGAGCAATCCGATCGGCCTGCGCCTGCAGGTCAACCGCACCTGGGACAGCCGCTGGTTCGCGGAAGGCCAGGATTATGGACGCATGCTTATCGAGGATCTGAAGATCCGCAAATATGTGTTCAAGACCCTGCCGCAGGCCGCGATTTCGAAGGTCGTCATCGAACGTCCGGCGAAGCTGTGTCGCGTGTCGATCTATGCCGCCCGTCCGGGTGTCATCATCGGCAAGAAGGGCGCGGACATCGAAAAGCTGCGCAAGGCGCTCGGTGAAATGACCGGCAGCGACGTGAGCCTGAACATCGTTGAAATCCGCAAGCCGGAAGTCGATGCCAAGCTCGTCGCGCAGGGCATTGCCGACCAGCTCGAACGCCGCGTTGCCTTCCGCCGTGCCATGAAGCGCGCGGTTCAGTCGGCGATGCGTCTGGGCGCCGAAGGCATCCGCATCAACTGTGCGGGTCGTCTCGGCGGCGCGGAAATCGCCCGCACCGAATGGTATCGCGAAGGCCGCGTTCCGCTGCACACGCTGCGTGCGAACGTCGATTATGCCGAGGCCGAAGCCCACACCGCCTATGGCGTGTGCGGCATGAAGGTCTGGATCTTCAAGGGCGAGATCCTGGGCCACGACCCGATGGCGACCGACCGGCTGATGCTCGACGCACAGACGTCGGGCGTTCGCCCGGCGCGCGATGAACGCCGTTAA
PROTEIN sequence
Length: 236
MGQKSNPIGLRLQVNRTWDSRWFAEGQDYGRMLIEDLKIRKYVFKTLPQAAISKVVIERPAKLCRVSIYAARPGVIIGKKGADIEKLRKALGEMTGSDVSLNIVEIRKPEVDAKLVAQGIADQLERRVAFRRAMKRAVQSAMRLGAEGIRINCAGRLGGAEIARTEWYREGRVPLHTLRANVDYAEAEAHTAYGVCGMKVWIFKGEILGHDPMATDRLMLDAQTSGVRPARDERR*