name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_500_bf_scaffold_547_curated_1
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3..221
|
50S ribosomal protein L22 n=2 Tax=Sphingopyxis RepID=I0IWA8_9SPHN
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
rplV; 50S ribosomal protein L22; K02890 large subunit ribosomal protein L22
|
|
SCNpilot_expt_500_bf_scaffold_547_curated_2
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
223..930
|
30S ribosomal protein S3 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WFF4_9SPHN
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3
|
|
SCNpilot_expt_500_bf_scaffold_547_curated_3
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
942..1373
|
50S ribosomal protein L16 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UW10_9SPHN
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16
|
|
SCNpilot_expt_500_bf_scaffold_547_curated_4
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1379..1582
|
50S ribosomal protein L29 n=2 Tax=Sphingopyxis RepID=I0IW91_9SPHN
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29
|
|
SCNpilot_expt_500_bf_scaffold_547_curated_5
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1593..1859
|
30S ribosomal protein S17 n=2 Tax=Sphingopyxis RepID=I0IWB0_9SPHN
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
rpsQ; 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17
|
|
SCNpilot_expt_500_bf_scaffold_547_curated_6
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1928..2296
|
50S ribosomal protein L14 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W4K7_9SPHN
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14
|
|
SCNpilot_expt_500_bf_scaffold_547_curated_7
Sphingopyxis terrae, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2299..2619
|
50S ribosomal protein L24 n=2 Tax=Sphingopyxis RepID=I0IWB1_9SPHN
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=33052 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis terrae.;"
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24
|
|
SCNpilot_expt_500_bf_scaffold_547_curated_8
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2612..3190
|
50S ribosomal protein L5 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UW15_9SPHN
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5
|
|
SCNpilot_expt_500_bf_scaffold_547_curated_9
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3243..3548
|
30S ribosomal protein S14 n=3 Tax=Sphingopyxis RepID=I0IW94_9SPHN
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
rpsN; 30S ribosomal protein S14; K02954 small subunit ribosomal protein S14
|
|
SCNpilot_expt_500_bf_scaffold_547_curated_10
Sphingopyxis terrae, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3561..3965
|
30S ribosomal protein S8 n=2 Tax=Sphingopyxis RepID=I0IW95_9SPHN
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=33052 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis terrae.;"
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8
|
|
SCNpilot_expt_500_bf_scaffold_547_curated_11
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3965..4498
|
50S ribosomal protein L6 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W4L3_9SPHN
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6
|
|
SCNpilot_expt_500_bf_scaffold_547_curated_12
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4502..4855
|
50S ribosomal protein L18 n=2 Tax=Sphingopyxis RepID=I0IWB4_9SPHN
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
rplR; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18
|
|
SCNpilot_expt_500_bf_scaffold_547_curated_13
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4858..5571
|
30S ribosomal protein S5 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UW21_9SPHN
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5
|
|
SCNpilot_expt_500_bf_scaffold_547_curated_14
Sphingopyxis terrae, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5576..5761
|
50S ribosomal protein L30 n=2 Tax=Sphingopyxis RepID=I0IW97_9SPHN
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=33052 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis terrae.;"
50S ribosomal protein L30; K02907 large subunit ribosomal protein L30
|
|
SCNpilot_expt_500_bf_scaffold_547_curated_15
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5763..5969
|
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WGA2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82481.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_547_curated_16
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6013..6558
|
50S ribosomal protein L15 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W4L7_9SPHN
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
rplO; 50S ribosomal protein L15; K02876 large subunit ribosomal protein L15
|
|
SCNpilot_expt_500_bf_scaffold_547_curated_17
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6667..8040
|
Protein translocase subunit SecY n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WFG9_9SPHN
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY
|
|
SCNpilot_expt_500_bf_scaffold_547_curated_18
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8088..8750
|
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopy
adk; adenylate kinase; K00939 adenylate kinase [EC:2.7.4.3]
Adenylate kinase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UW26_9SPHN
|
|
SCNpilot_expt_500_bf_scaffold_547_curated_19
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8799..9518
|
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UVI8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82485.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_547_curated_20
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9534..10061)
|
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WGA6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82486.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_547_curated_21
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10058..10588)
|
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W4M2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82487.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_547_curated_22
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10760..11248
|
TmRNA-binding small protein A n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WFH6_9SPHN
TmRNA-binding small protein A {ECO:0000313|EMBL:ENY82488.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
tmRNA-binding small protein A
|
|
SCNpilot_expt_500_bf_scaffold_547_curated_23
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11321..13585)
|
Bifunctional malic enzyme oxidoreductase/phosphotransacetylase {ECO:0000313|EMBL:ENY82489.1}; EC=1.1.1.40 {ECO:0000313|EMBL:ENY82489.1};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
malic enzyme; K00029 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
Bifunctional malic enzyme oxidoreductase/phosphotransacetylase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UW32_9SPHN
|
|
SCNpilot_expt_500_bf_scaffold_547_curated_24
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13718..16318
|
DNA mismatch repair protein MutS n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UVJ3_9SPHN
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
DNA mismatch repair protein MutS; K03555 DNA mismatch repair protein MutS
|
|
SCNpilot_expt_500_bf_scaffold_547_curated_25
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16315..19071
|
PII uridylyl-transferase; K00990 [protein-PII] uridylyltransferase [EC:2.7.7.59]
Bifunctional uridylyltransferase/uridylyl-removing enzyme n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WGB0_9SPHN
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|HAMAP-Rule:MF_00277, ECO:0000256|SAAS:SAAS00228994}; Short=UTase/UR {ECO:0000256|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII] modification enzyme {ECO:0000256|HAMAP-Rule:MF_00277}; Bifunctional nitrogen sensor protein {ECO:0000256|HAMAP-Rule:MF_00277}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
|
|
SCNpilot_expt_500_bf_scaffold_547_curated_26
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19074..20408)
|
Lipase 2 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WFI1_9SPHN
Lipase 2 {ECO:0000313|EMBL:ENY82493.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
|
|
SCNpilot_expt_500_bf_scaffold_547_curated_27
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20437..21648)
|
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
pheT; phenylalanyl-tRNA synthetase subunit beta; K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UW38_9SPHN
|
|
SCNpilot_expt_500_bf_scaffold_547_curated_28
R_Erythrobacter_63_10, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22374..22820
|
Tax=RIFCSPHIGHO2_12_FULL_Erythrobacter_63_10_curated
|
|
SCNpilot_expt_500_bf_scaffold_547_curated_29
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22766..23860)
|
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
pheS; phenylalanyl-tRNA synthetase subunit alpha; K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UVJ8_9SPHN
|
|
SCNpilot_expt_500_bf_scaffold_547_curated_30
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24023..24925)
|
AraC family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WGB6_9SPHN
AraC family transcriptional regulator {ECO:0000313|EMBL:ENY82496.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
AraC family transcriptional regulator
|