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SCNpilot_expt_500_bf_scaffold_547_curated_13

Organism: scnpilot_dereplicated_Sphingopyxis_1

near complete RP 50 / 55 BSCG 49 / 51 ASCG 10 / 38
Location: 4858..5571

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S5 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UW21_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 237.0
  • Bit_score: 468
  • Evalue 3.00e-129
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 237.0
  • Bit_score: 468
  • Evalue 4.20e-129
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 similarity KEGG
DB: KEGG
  • Identity: 94.2
  • Coverage: 242.0
  • Bit_score: 446
  • Evalue 6.50e-123

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 714
ATGGCTGATGAAAACACCACGGGTCAGGGCAACCAGCCCGAGGCGATCCTCGCGCCTGAAACCACCAACGCCGAAGTCACGGGTCGTCGCGGTCGCGGCGGTCGCGATGGCGGCCGCGGCGGTCGTGAAGGTGGCCGTGGCCGCCGCGACGATCGTCGTCCGCGCGACGAAGATGGTGGCGAAGAGCTGATTGAAAAGCTCGTCCACATCAACCGCGTTTCGAAGACCGTGAAGGGCGGCAAGCGCTTTGGTTTCGCCGCGCTCGTCGTCGTCGGTGATGGCAAGGGCCGCGCCGGTTTCGGTCATGGCAAGGCGCGCGAAGTGCCCGAAGCCATTTCGAAGGCGACCGCCGCTGCGAAGAAGGCGATGATTCGCGTTCCGCTGCGCGACGGCCGCACGCTGCACCATGACGGTCGAGGCCATTTCGGCGCCGGCAACGTCACCGTGCGTTCGGCGCCTGCAGGTACCGGCATCATCGCTGGTGGCCCGATGCGTGCCGTGTTCGAATCGCTCGGTGTTGCCGATGTGGTGACCAAGTCGGTCGGCACGTCGAACCCCTACAACATGATCCGCGCGACCTTCCAGGCGCTCGGCGAACAGACCAGCCCGAAGTCGGTCGCGCAGCGTCGCGGCAAGAAGGTTTCGGACCTGATCAAGCGCGGCGGCGTGTCCGATCGTGCAGCCGAGGCTGAAGCCGCGGCGGTGACGGAGTAA
PROTEIN sequence
Length: 238
MADENTTGQGNQPEAILAPETTNAEVTGRRGRGGRDGGRGGREGGRGRRDDRRPRDEDGGEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRAGFGHGKAREVPEAISKATAAAKKAMIRVPLRDGRTLHHDGRGHFGAGNVTVRSAPAGTGIIAGGPMRAVFESLGVADVVTKSVGTSNPYNMIRATFQALGEQTSPKSVAQRRGKKVSDLIKRGGVSDRAAEAEAAAVTE*