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SCNpilot_expt_500_bf_scaffold_547_curated_11

Organism: scnpilot_dereplicated_Sphingopyxis_1

near complete RP 50 / 55 BSCG 49 / 51 ASCG 10 / 38
Location: 3965..4498

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L6 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W4L3_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 177.0
  • Bit_score: 351
  • Evalue 6.80e-94
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 177.0
  • Bit_score: 351
  • Evalue 9.60e-94
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 96.0
  • Coverage: 177.0
  • Bit_score: 345
  • Evalue 1.20e-92

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGTCGCGCATCGGTAAAAAGGCAGTGGAGATCCCCAGCGGCGTAACCGCCGCGATCGACGGCGGCCAGCTGTCGGTCAAGGGCCCCAAGGGCACGCTGGCGATGCCGCTGTCCGACAACATCAAATATGAAGTCGGCGAAGGCGCCATCTCGGTGCAGCCCGCGAACGAAAGCCGCGAAGCGCGCGCTTTCTGGGGTATGCAGCGTACGCTGGTGCAGAACCTGATCACGGGCGTGACCGAGGGCTTCACCAAGGTGCTCGAAATCACGGGTGTCGGCTACCGCGCCAACGCGCAGGGCAAGAATCTGAAGCTGCAGCTCGGCTACAGCCACGATGTCGATTTCGCGGTGCCGGAAGGCATCGAGATCAAGACGCCGGATAACACGACGATCGAGATCAGCGGCATCGACAAGCAGAAGGTCGGCCAGGTCGCGGCGGAAATCCGCCGCTGGCGCAAGCCCGAACCCTATAAGGGCAAGGGTATCAAGTATCGCGGCGAGTACATCTTCCGCAAAGAAGGCAAGAAGAAGTAA
PROTEIN sequence
Length: 178
MSRIGKKAVEIPSGVTAAIDGGQLSVKGPKGTLAMPLSDNIKYEVGEGAISVQPANESREARAFWGMQRTLVQNLITGVTEGFTKVLEITGVGYRANAQGKNLKLQLGYSHDVDFAVPEGIEIKTPDNTTIEISGIDKQKVGQVAAEIRRWRKPEPYKGKGIKYRGEYIFRKEGKKK*