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SCNpilot_expt_500_bf_scaffold_6929_curated_4

Organism: scnpilot_dereplicated_Sphingopyxis_1

near complete RP 50 / 55 BSCG 49 / 51 ASCG 10 / 38
Location: comp(3251..3985)

Top 3 Functional Annotations

Value Algorithm Source
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.2
  • Coverage: 248.0
  • Bit_score: 463
  • Evalue 1.40e-127
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; K01814 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] similarity KEGG
DB: KEGG
  • Identity: 91.8
  • Coverage: 244.0
  • Bit_score: 436
  • Evalue 7.00e-120
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WFV9_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 97.2
  • Coverage: 248.0
  • Bit_score: 463
  • Evalue 9.90e-128

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 735
ATGGCGCCCCTGATCCTCTTCCCCGCGATCGACCTCAAGGGCGGGCAGGTGGTGCGGCTCGCCGAGGGCGATATGGCGCGCGCGACCGTCTATGGCGACGATCCGGCGGCGCAGGCACGCCTGTTCGCGGACGCGGGCGCCAGCCATTTGCACGTCGTCGATCTCGACGGCGCCTTCGCCGGTGAAAGCGTCAACGGCGCGGCGGTCGAAAATATCGTTGCGGCCTTTCCGGGCAAGGTGCAGGTCGGCGGCGGTATCCGCGATCGCGCGGGCGTCGATCGCTGGCTCGCGCTCGGGGTGGAGCGCGTCATCATCGGCACCGCGGCGCTCAAAGACCCCGATTTCGTCAAATCGGCCGCGCGCGACCTGCCGGGCCGGATCATCGTCGGCGTCGATGCGCGCGATGGCATGGTCGCGACCGAAGGCTGGGCGGATGTCTCCGACGTGCGCGTCGAGGATCTGGCGCGGCGCTTCGAGGATGCCGGCGTCGCCGCGCTGCTGTTCACCGACGTCGGGCGCGACGGGCTGCTCAAGGGCTGCAACGTCGCCGCGACCGTTGCGCTGGCGCAGGCGGTCGCCATCCCGGTGATCGCGAGCGGCGGCGTCGCGGATATCCGCGACATCCACGCGCTGCGCCCGCACGTCGCCGATGGAATCGAAGGCGTGATTACCGGCCGCGCGCTCTATGACGGCCGCCTCGACCTCGCCGAAGCGATCGCGGCGGGGCAGGCGTGA
PROTEIN sequence
Length: 245
MAPLILFPAIDLKGGQVVRLAEGDMARATVYGDDPAAQARLFADAGASHLHVVDLDGAFAGESVNGAAVENIVAAFPGKVQVGGGIRDRAGVDRWLALGVERVIIGTAALKDPDFVKSAARDLPGRIIVGVDARDGMVATEGWADVSDVRVEDLARRFEDAGVAALLFTDVGRDGLLKGCNVAATVALAQAVAIPVIASGGVADIRDIHALRPHVADGIEGVITGRALYDGRLDLAEAIAAGQA*