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SCNpilot_expt_500_bf_scaffold_1423_curated_19

Organism: scnpilot_dereplicated_Sphingopyxis_1

near complete RP 50 / 55 BSCG 49 / 51 ASCG 10 / 38
Location: 17850..18806

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.7
  • Coverage: 318.0
  • Bit_score: 617
  • Evalue 9.80e-174
pseudouridine synthase RluD; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] similarity KEGG
DB: KEGG
  • Identity: 88.1
  • Coverage: 318.0
  • Bit_score: 566
  • Evalue 4.50e-159
Pseudouridine synthase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W9Z9_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 98.7
  • Coverage: 318.0
  • Bit_score: 617
  • Evalue 7.00e-174

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 957
ATGAAGGGGGACGACGACATTCTGACCGTGGCGTTGGGCAACAGCGCGGCCGGGTTGCGGCTCGACCGCGCGCTGGCCGAGGCTTTGCCCAGCCTGTCGCGCGAGCGCGTCAAGACGCTGATCAAGGGCGGCCGCGTCACCGATGCCGGCGGGCGCATCCTTTGGGATCCCGCCGCCAAGGCATCCGCACCGGCGAAGCTCGAACTGCGCCTGCCCGCCCCCGCCCCCGCGCATAATGTGGCGCAGGACATGAATCTCGTCATCGCCTTTGAGGACGAGCATCTGATTGTGGTCGACAAGCCCGCGGGGATGGTCGTTCACCCGGCTGCCGGCAATCTCGACGGCACTATGGTCAACGCGCTGCTCCATCATTGCGCCGGGCAATTGTCGGGAATCGGCGGCGTCGCGCGCCCCGGCATCGTCCACCGCATCGACAAGGATACCAGCGGGCTGATCGTCGCCGCGAAACATGACAAGGCGCATGAGGGGCTGGCGAAGCAATTCGCCGCGCACAGCATCGACCGCCGCTATCTCGCGATCGCGACCGGTCGCCCGATGCCCGCCAACGGCACGGTAGAGGCCGCGCTCGGCCGGTCGAGCGTCAATCGCAAGAAGATGGCGGTGGTCGAGCCGGGCCGCGGCAAACATGCGATCACCCATTACCGGACGATCGAGCCGCTGCGAGACGCAACTTTGGTGGAATGCCGGCTGGAAACGGGCCGCACGCATCAGGTTCGCGTCCATATGGCGCATATCGGCCACCCGCTCGTCGGTGATCCGGTCTATGGGCGCGCCCGAAAGCCGCTTTCGGATCTGCTTAAAGCCCGCCATTTTGCGCGTCAGGCGTTGCATGCAGCCCATTTGGGCTTTATTCATCCGGTGACCGGTAACAGCATCGCGCTCGACAGCGAACTCCCAGCGGACATGCGGGAACTGATCGATGAACTGCGCGTTTAG
PROTEIN sequence
Length: 319
MKGDDDILTVALGNSAAGLRLDRALAEALPSLSRERVKTLIKGGRVTDAGGRILWDPAAKASAPAKLELRLPAPAPAHNVAQDMNLVIAFEDEHLIVVDKPAGMVVHPAAGNLDGTMVNALLHHCAGQLSGIGGVARPGIVHRIDKDTSGLIVAAKHDKAHEGLAKQFAAHSIDRRYLAIATGRPMPANGTVEAALGRSSVNRKKMAVVEPGRGKHAITHYRTIEPLRDATLVECRLETGRTHQVRVHMAHIGHPLVGDPVYGRARKPLSDLLKARHFARQALHAAHLGFIHPVTGNSIALDSELPADMRELIDELRV*