ggKbase home page

SCNpilot_expt_500_bf_scaffold_464_curated_21

Organism: scnpilot_dereplicated_Sphingopyxis_1

near complete RP 50 / 55 BSCG 49 / 51 ASCG 10 / 38
Location: comp(20127..21623)

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system protein E n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UY69_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 498.0
  • Bit_score: 969
  • Evalue 1.50e-279
Type II secretion system protein E {ECO:0000313|EMBL:ENY83159.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 498.0
  • Bit_score: 969
  • Evalue 2.10e-279
type II secretion system protein E; K02283 pilus assembly protein CpaF similarity KEGG
DB: KEGG
  • Identity: 96.6
  • Coverage: 498.0
  • Bit_score: 950
  • Evalue 2.90e-274

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1497
ATGAGTGCATTCGGACGCCGTCCCGGAACCGCAGGCCGCCCCGCCTTTGGCGTGGCCAAGCCGATGCAGGCAGGCCCCGGCATGGCTGGCGGCGCGCAATTTCCTGCGATCGACACGCCGGCCGCCGAGGCACCCCCGCCGCCGCCGTCGAACCTGAGCCCCGAAATGGAGGCGATGGAGCGGCTGAACCAGCGCTCGACCGCCGAGGCGATGGAACCCGAAAAGGCGCAGGGTTTCGAAGCCAGCGTCCACAAGATCAAGGAACAGGTGCTGCCGCGCCTGCTCGAACGCGTCGATCCCGAGGCCGCGGCGACGCTGTCGAAGGACGAACTGACCGAGGAATTTCGCCCGATCATCCTCGAAGTGCTCGCCGAGCTGCGCATCACGCTCAACCGCCGCGAGCAATTCGCGCTCGAAAAGGTGCTCGTCGACGAATTGCTCGGCTTCGGCCCGCTCGAAGAGCTGCTCTCCGACCCCGACATCAGCGACATCATGGTCAACGGGCCGTATCAGACCTATGTCGAGCGCAAGGGCCAGCTCGTCATCGCGCCGATCCAGTTCCGCGACGAACAGCATCTTTTCCAGATCGCCCAGCGCATCTGTAACCAGGTCGGCCGCCGCGTTGACCAGACAACCCCGCTCGCCGACGCCCGTCTGAAGGACGGCAGCCGCGTCAACGTGATCGTGCCGCCGCTCTCGCTGCGCGGCACCGCGATTTCGATTCGTAAATTCTCGGCCAAGCCGATCACGCTCGACATGCTGTGCCAGTGGGGCGCCATGAGCCAGAAGATGTGCACCGCGCTGAAGATCGCGGGTGCGAGCCGGTTCAACATCGTCATCTCGGGCGGTACGGGTTCGGGTAAGACGACGATGCTCAATGCCCTCTCCAAGATGATCGACCCCGGCGAGCGCGTGCTGACCATCGAGGACGCCGCCGAATTGCGGCTGCAGCAGCCGCACTGGCTGCCGCTCGAAACGCGCCCCGCAAACCTTGAAGGCAATGGCGCCATTCACATGGGCGACCTCGTCAAGAACGCCCTGCGTATGCGTCCCGACCGCATCATCATGGGCGAAGTCCGCGGCGCGGAGTGTTTCGACCTCCTCGCCGCGATGAACACCGGTCACGACGGGTCGATGTGTACGCTGCACTCGAACAGCCCGCGCGAATGCCTCGGCCGTATGGAAAATATGGTGCTGATGGGCGACATCAAGATTCCGAAGGAAGCGATCTCGAAACAGATCGCCGACTCGGTCGACCTGATCGTCCAGATCAAGCGCCTGCGCGATGGCTCGCGCCGCGTCACCAACGTCACCGAGGTCATCGGCATGGAAGGCGACGTCATCGTCACCCAGGAATTGTTCAAGTTCGAATATTTGGACGAGGACAAGGACGGAAAGATCATCGGCGAATATCGCTCGATGGGCCTGCGTCCCTATACGCTGGAAAAGGCGCGCCAGTACGGCTTCGATCAGCCCTACCTCGAGGCGTGCCTGTAA
PROTEIN sequence
Length: 499
MSAFGRRPGTAGRPAFGVAKPMQAGPGMAGGAQFPAIDTPAAEAPPPPPSNLSPEMEAMERLNQRSTAEAMEPEKAQGFEASVHKIKEQVLPRLLERVDPEAAATLSKDELTEEFRPIILEVLAELRITLNRREQFALEKVLVDELLGFGPLEELLSDPDISDIMVNGPYQTYVERKGQLVIAPIQFRDEQHLFQIAQRICNQVGRRVDQTTPLADARLKDGSRVNVIVPPLSLRGTAISIRKFSAKPITLDMLCQWGAMSQKMCTALKIAGASRFNIVISGGTGSGKTTMLNALSKMIDPGERVLTIEDAAELRLQQPHWLPLETRPANLEGNGAIHMGDLVKNALRMRPDRIIMGEVRGAECFDLLAAMNTGHDGSMCTLHSNSPRECLGRMENMVLMGDIKIPKEAISKQIADSVDLIVQIKRLRDGSRRVTNVTEVIGMEGDVIVTQELFKFEYLDEDKDGKIIGEYRSMGLRPYTLEKARQYGFDQPYLEACL*