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SCNpilot_expt_500_bf_scaffold_464_curated

Search features with annotation key words

Displaying items 1-30 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_464_curated_1
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(617..1126)
DNA (510bp) protein (170aa)
MarR family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W2C7_9SPHN
MarR family transcriptional regulator {ECO:0000313|EMBL:ENY81662.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
MarR family transcriptional regulator
SCNpilot_expt_500_bf_scaffold_464_curated_2
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1205..2290
DNA (1086bp) protein (362aa)
Branched-chain-amino-acid aminotransferase {ECO:0000256|RuleBase:RU004517}; EC=2.6.1.42 {ECO:0000256|RuleBase:RU004517};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
branched-chain amino acid aminotransferase; K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42]
Branched-chain-amino-acid aminotransferase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WDX6_9SPHN
SCNpilot_expt_500_bf_scaffold_464_curated_3
unknown

Not on your lists

3104..3508
DNA (405bp) protein (135aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_464_curated_4
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3790..3993
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9USC5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81189.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_464_curated_5
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4013..4447)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9URX5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81190.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_464_curated_6
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4789..5565
DNA (777bp) protein (259aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WCL5_9SPHN
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ENY81191.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_expt_500_bf_scaffold_464_curated_7
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5562..6353
DNA (792bp) protein (264aa)
Enoyl-CoA hydratase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W168_9SPHN
Enoyl-CoA hydratase {ECO:0000313|EMBL:ENY81192.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
enoyl-CoA hydratase/isomerase
SCNpilot_expt_500_bf_scaffold_464_curated_8
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6521..7249)
DNA (729bp) protein (243aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UXN9_9SPHN
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ENY83175.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
enoyl-CoA hydratase/isomerase
SCNpilot_expt_500_bf_scaffold_464_curated_9
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7439..7906
DNA (468bp) protein (156aa)
Hemerythrin HHE cation binding domain-containing protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UY87_9SPHN
Hemerythrin HHE cation binding domain-containing protein {ECO:0000313|EMBL:ENY83174.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hemerythrin HHE cation binding domain-containing protein
SCNpilot_expt_500_bf_scaffold_464_curated_10
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7916..9556)
DNA (1641bp) protein (547aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WHR3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY83173.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_464_curated_11
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9565..10425)
DNA (861bp) protein (287aa)
Putative lipoprotein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W6P0_9SPHN
Putative lipoprotein {ECO:0000313|EMBL:ENY83172.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
putative lipoprotein
SCNpilot_expt_500_bf_scaffold_464_curated_12
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10748..11017
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WI77_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY83171.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_464_curated_13
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11118..11681)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UXN2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY83170.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_464_curated_14
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11825..14299)
DNA (2475bp) protein (825aa)
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UY81_9SPHN
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:ENY83169.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
SCNpilot_expt_500_bf_scaffold_464_curated_15
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14346..16142)
DNA (1797bp) protein (599aa)
AMP-dependent synthetase and ligase; K00666 fatty-acyl-CoA synthase [EC:6.2.1.-]
AMP-dependent synthetase and ligase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WHQ6_9SPHN
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ENY83168.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_464_curated_16
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16273..16848
DNA (576bp) protein (192aa)
Regulatory protein RecX n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W6N4_9SPHN
Regulatory protein RecX {ECO:0000313|EMBL:ENY83167.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
regulatory protein RecX; K03565 regulatory protein
SCNpilot_expt_500_bf_scaffold_464_curated_17
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16923..17804
DNA (882bp) protein (294aa)
NADH dehydrogenase; K00356 NADH dehydrogenase [EC:1.6.99.3]
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WI70_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY83166.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_464_curated_18
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18247..18951)
DNA (705bp) protein (235aa)
Leucyl/phenylalanyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088489}; EC=2.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088482};; L/F-transferase {ECO:0000256|HAMAP-Rule:MF_00688}; Leucyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; Phenyalanyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
aat; leucyl/phenylalanyl-tRNA--protein transferase; K00684 leucyl/phenylalanyl-tRNA--protein transferase [EC:2.3.2.6]
Leucyl/phenylalanyl-tRNA--protein transferase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WHP9_9SPHN
SCNpilot_expt_500_bf_scaffold_464_curated_19
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19017..19859)
DNA (843bp) protein (281aa)
Type 11 methyltransferase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W6M8_9SPHN
Type 11 methyltransferase {ECO:0000313|EMBL:ENY83162.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
type 11 methyltransferase
SCNpilot_expt_500_bf_scaffold_464_curated_20
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19915..20100
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UXL8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY83160.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCNpilot_expt_500_bf_scaffold_464_curated_21
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20127..21623)
DNA (1497bp) protein (499aa)
Type II secretion system protein E n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UY69_9SPHN
Type II secretion system protein E {ECO:0000313|EMBL:ENY83159.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
type II secretion system protein E; K02283 pilus assembly protein CpaF
SCNpilot_expt_500_bf_scaffold_464_curated_22
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21803..24112
DNA (2310bp) protein (770aa)
Patatin n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WHP4_9SPHN
Patatin {ECO:0000313|EMBL:ENY83158.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
patatin
SCNpilot_expt_500_bf_scaffold_464_curated_23
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24143..25279)
DNA (1137bp) protein (379aa)
Chaperone protein DnaJ n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W6M3_9SPHN
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
chaperone protein DnaJ; K03686 molecular chaperone DnaJ
SCNpilot_expt_500_bf_scaffold_464_curated_24
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25339..27243)
DNA (1905bp) protein (635aa)
Chaperone protein DnaK n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WI59_9SPHN
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
dnaK; molecular chaperone DnaK; K04043 molecular chaperone DnaK
SCNpilot_expt_500_bf_scaffold_464_curated_25
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27407..27958
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UY64_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY83154.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein; K09796 hypothetical protein
SCNpilot_expt_500_bf_scaffold_464_curated_26
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27965..28447
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WHN9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY83153.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_464_curated_27
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28463..29059)
DNA (597bp) protein (199aa)
N-acetyltransferase GCN5 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W6L8_9SPHN
N-acetyltransferase GCN5 {ECO:0000313|EMBL:ENY83152.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
N-acetyltransferase GCN5
SCNpilot_expt_500_bf_scaffold_464_curated_28
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(29308..29577)
DNA (270bp) protein (90aa)
50S ribosomal protein L27 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WI51_9SPHN
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
rpmA; 50S ribosomal protein L27; K02899 large subunit ribosomal protein L27
SCNpilot_expt_500_bf_scaffold_464_curated_29
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(29625..30095)
DNA (471bp) protein (157aa)
50S ribosomal protein L21 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UXK4_9SPHN
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
rplU; 50S ribosomal protein L21; K02888 large subunit ribosomal protein L21
SCNpilot_expt_500_bf_scaffold_464_curated_30
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30322..30651
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UY57_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY83149.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
Displaying items 1-30 of 79 in total

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