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SCNpilot_expt_500_bf_scaffold_1505_curated_12

Organism: scnpilot_dereplicated_Sphingopyxis_1

near complete RP 50 / 55 BSCG 49 / 51 ASCG 10 / 38
Location: 9672..10298

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L4 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WFF0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 208.0
  • Bit_score: 408
  • Evalue 4.20e-111
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 208.0
  • Bit_score: 408
  • Evalue 5.90e-111
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 similarity KEGG
DB: KEGG
  • Identity: 93.8
  • Coverage: 208.0
  • Bit_score: 393
  • Evalue 4.40e-107

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 627
ATGAAGGTCAAGGTACAGACCCTCGATGGCAAGGCTGGCGCCGACATCGATCTTAACGACGACGTCTTCGGCGTCGACGCGCGGGCGGACATCCTCCACCGTGTCGTCGCCTGGCAGCTCGAAAAGCGTCGCGGTCCCGCCCGCGCCGCCCGCGAGCGCAGCGACGTTGCCCGCACCGGCAAGAAGTTCGGTCGCCAGAAGGGCGGCGGTACCGCCCGTCACGGCGATCGCAAGGCGCCGATTTTCATCGGCGGTGGCAAGGCGCACGGTCCCCGGGCCCGCACTTTCGGCCACTCGCTGAACAAGAAGATCCGCGCTCTTGGTCTCAAGATGGCGCTGAGCGACAAGGCAAAGGGCGGCAAGCTCGTTGTCATCGACACGCTCGAGCTCAAGGAAGCCAAGACCAAGGTGCTGGCCGGCAAGCTCGGCAAGCTCGACCTCGGTCGCCGTGCGCTCTTCATCGACGGCGATGCGGTCCATGACAGCTTCGCCCAGGCTTCGGCCAACATCGTCGGCGTCGATTCGCTGCCGGCGATCGGTGCCAACGTCTATGACATCCTTCGCGCCGACACGCTGGTCCTGACCCGCGCGGCGGTCGAAAAGCTGGAGGCCCGCTGCAATGGCTAA
PROTEIN sequence
Length: 209
MKVKVQTLDGKAGADIDLNDDVFGVDARADILHRVVAWQLEKRRGPARAARERSDVARTGKKFGRQKGGGTARHGDRKAPIFIGGGKAHGPRARTFGHSLNKKIRALGLKMALSDKAKGGKLVVIDTLELKEAKTKVLAGKLGKLDLGRRALFIDGDAVHDSFAQASANIVGVDSLPAIGANVYDILRADTLVLTRAAVEKLEARCNG*