ggKbase home page

SCNpilot_expt_500_bf_scaffold_562_curated_21

Organism: scnpilot_dereplicated_Sphingopyxis_1

near complete RP 50 / 55 BSCG 49 / 51 ASCG 10 / 38
Location: comp(20106..21506)

Top 3 Functional Annotations

Value Algorithm Source
RND efflux system outer membrane lipoprotein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WFG5_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 98.3
  • Coverage: 469.0
  • Bit_score: 869
  • Evalue 2.00e-249
RND efflux system outer membrane lipoprotein {ECO:0000313|EMBL:ENY82161.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.3
  • Coverage: 469.0
  • Bit_score: 869
  • Evalue 2.70e-249
RND efflux system outer membrane lipoprotein similarity KEGG
DB: KEGG
  • Identity: 62.4
  • Coverage: 463.0
  • Bit_score: 556
  • Evalue 8.80e-156

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1401
ATGAAACGCGCGCCCTTCCTGATGATCGCAGCGCCGCTGCTGCTTGCGGGTTGTTCGCTTGCGCCGAAGACGGTGTTGCCGCCGCCCCCGGTGCCGCAGGGCTGGCCAGTCGGCGACGCCTATCTGATCCAGAGCGAGGCGGCGCTGCCGATCCTGTCCTACAAACAATTGTTCACCGACGCGCGGCTCCAGTCGCTCGTCGAACAGGCGCTCGCGAACAATCGCGATCTGCGCACCGCCTATGCCAATCTGGCGGCGGCGCGCGCGCAGGTGCGGGTCAGCCGGGCGGCGCAATTCCCGGCGATCGGCGTCAGCGCGAGCGGCGACTATGCCGACCGTGGCGGCTCCGGCGGCGCGGGCAGCAGTTTCGCGCTGCAAGGCGGGGTCACCGCCTTCGAACTCGACCTGTTCGGGCGCCTCGCCAACGCGAATGCCGCCGACCGCGACCGCGCGCTGGCGACCGAAGCCGCGTCGCGCACCGTGCGGCTGAGTCTGATTGCCGATCTTGCCAATGCCTGGGCCGCCTATGGCGCCGACCGCGACCTGCTCGCCATTGCGCAGGAAACCGCGACCAATGCGCGCGAAAATGTCCGGCTGACGAAGGCGCGGCTCGACGGCGGCGTCGCGCCGCGCACCGACCTCAGGCAAGCCGAACAGATATTGGCGACCGCCGAGGACGCGATCGCGCAGCAGCAGACTGCGATCGCGCAGGACGAAAATCTGATCCGCCTGCTCGTCGGCGGCGATGTCGATCCGGCGCTGTTCCCCGCCAGCTTGGCCGAGGTGACGCCCGCGGTTGCGGCGCCCCCGGCCGGGATGCGGTCGGAAATCCTGTTGCGGCGGCCCGACGTGATCCAGGCCGAATATCTGCTGCGCGCCGCCAATGCCGATATCGGCGTCGCACGCGCACGCCTGTTCCCGACGATTTCGCTGACCGGCCTGCTGGGCTTTGCCAGCGACGCGCTGTCGAGCCTGTTCGACAAGGGCTCCTTCGCTTGGTCGGCGGGCGGGGATGCCAGCGCCTCGATCTTCGATTTCGGTGGCCGCCGCGCCGGGGTGGCGGTGAGCGAGGCGCAGCGCGATGCCGCGCTTGCCAGCTATGAAGGCGCGATCCAGACCGCCTTTCGCGAAGTCGCCGACGCGCTCGCGGTGCAGGGCACGATCGCCGAGCGCGTCCGCGCCGCCGCCGCCAACACCGAAGCCGCGGCCGATACGGCCAGACTTAGCGATGCGCGCTACAAGGGCGGGGTCGACAGTTTCCTCGCCAGCCTCGACGCGCAGCGCAGCCTCTATGCCGCGCGGCGCAGCGAAATCGCGACGGGCCTGCTGCTTGTCCAGACCCGCATCGCATTGTTCCGCGCGCTTGGCGGCGACAGCAGCGCGGGGTCCGCGGCGCCTTAA
PROTEIN sequence
Length: 467
MKRAPFLMIAAPLLLAGCSLAPKTVLPPPPVPQGWPVGDAYLIQSEAALPILSYKQLFTDARLQSLVEQALANNRDLRTAYANLAAARAQVRVSRAAQFPAIGVSASGDYADRGGSGGAGSSFALQGGVTAFELDLFGRLANANAADRDRALATEAASRTVRLSLIADLANAWAAYGADRDLLAIAQETATNARENVRLTKARLDGGVAPRTDLRQAEQILATAEDAIAQQQTAIAQDENLIRLLVGGDVDPALFPASLAEVTPAVAAPPAGMRSEILLRRPDVIQAEYLLRAANADIGVARARLFPTISLTGLLGFASDALSSLFDKGSFAWSAGGDASASIFDFGGRRAGVAVSEAQRDAALASYEGAIQTAFREVADALAVQGTIAERVRAAAANTEAAADTARLSDARYKGGVDSFLASLDAQRSLYAARRSEIATGLLLVQTRIALFRALGGDSSAGSAAP*