ggKbase home page

SCNpilot_cont_300_bf_scaffold_74_curated_2

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(251..2350)

Top 3 Functional Annotations

Value Algorithm Source
Elongation factor G n=1 Tax=Variovorax paradoxus (strain S110) RepID=EFG_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 98.1
  • Coverage: 699.0
  • Bit_score: 1364
  • Evalue 0.0
  • rbh
translation elongation factor G; K02355 elongation factor G similarity KEGG
DB: KEGG
  • Identity: 98.1
  • Coverage: 699.0
  • Bit_score: 1364
  • Evalue 0.0
Elongation factor G {ECO:0000255|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000255|HAMAP-Rule:MF_00054};; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.1
  • Coverage: 699.0
  • Bit_score: 1364
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2100
ATGTCCCGCAAGACCCCCATCGAGCGCTACCGCAACATCGGCATCTCCGCGCACATCGACGCTGGCAAGACCACGACGACCGAACGTATCCTGTTCTACACCGGTGTGAACCACAAGATCGGTGAAGTGCACGACGGTGCCGCCACGATGGACTGGATGGAGCAAGAGCAAGAGCGCGGTATCACGATCACGTCCGCTGCCACTACCTGCTTCTGGAAGGGCATGGCTGGCAAGTTCGACGAACACCGCATCAACATCATCGACACCCCCGGCCACGTGGACTTCACCATTGAAGTCGAGCGCTCGATGCGCGTGCTGGACGGCGCCGTCATGGTGTACGACGCCGTCGGCGGCGTGCAGCCCCAGTCGGAAACCGTCTGGCGCCAGGCCAACAAGTACAAGGTGCCCCGTCTCGCGTTCGTCAACAAGATGGACCGTACCGGCGCCGACTTCCTGCGCGTTCGCCAGATGATGATCGACCGCCTGAAGGCCAACCCCGTCGTGATCCAGATCCCGATCGGTGCAGAAGAGCACTTCCAGGGCATCGTCGACCTCGTGAAGATGAAGGCGATCATCTGGGACGAAGACAAGGGCGTGACCTTCCAGTACGGCGACATCCCGGCCAACCTGACCGATGTCTGCAACGAATACCGTGAAAAGCTCGTCGAAGCGGCTGCCGAAGCCAGCGAAGAGCTGATGAACAAGTACCTCGAAGGCGGCGAGCTGAGCGAGGAAGAAATCAAGAAGGCCATCCGTCAGCGCACCATCGCCGGCGAAATCCAGCCGATGCTGTGCGGCTCGGCCTTCAAGAACAAGGGCGTGCAGGCCATGCTCGACGCCGTCGTCGAATACATGCCGTCGCCGCTGGACATCCCGCCGGTGGCCGGCCTGGACGAAGACGAAGCGCCTGTCGTGCGCAAGGCTGACGACAACGAGAAATTCTCGGCTCTGGCATTCAAGCTGATGACCGACCCGTTCGTGGGTCAGCTGACCTTCGTGCGCGTCTACTCGGGCGTGCTGACCAAGGGCGACAGCGTCTACAACCCGGTGCGCGGCAAGAAGGAACGTATCGGCCGTATCGTGCAGATGCACGCCAACAACCGCGAAGAAGTGAATGAAATCCGCGCCGGCGACATCGCCGCCTGCGTGGGCTTGAAGGAAGTGACCACGGGCGAAACCCTGTGCGACCCGACGGCCGTCGTGACCCTCGAGCGCATGGTGTTCCCGGAATCGGTGATCTCGCAGGCCGTCGAGCCGAAGACCAAGGCCGACCAGGAAAAGATGGGCATCGCCCTGCAACGCCTGGCTCAGGAAGATCCTTCGTTCCGCGTGAAGACCGACGAAGAATCGGGCCAGACCATCATCGCCGGCATGGGCGAGCTCCACCTTGAAATCATCGTGGACCGCATGAAGCGCGAATTCGGCGTGGAAGCCAACGTGGGCAAGCCGCAAGTGGCCTACCGCGAAACGATCCGCAAGACCGTCGAAGAAGCCGAAGGCAAGTTCGTTCGCCAGTCGGGCGGCAAGGGCCAGTACGGTCACGTGATCCTGAAGCTCGAGCCGCAGGAAGCCGGCAAGGGCTTCGAGTTCGTCGACGCCATCAAGGGCGGCGTGGTTCCTCGCGAGTACATCCCCGCGGTGGAAAAGGGCGTTGTCGAAGCGCTGACGCAAGGCGTGCTGGCGGGCTACCCCGTCGTGGACGTCAAGGTCACGCTGCACTTCGGTTCGTACCACGACGTGGACTCGAACGAAATGGCGTTCAAGATGGCCGCGATCTTCGGCTTCAAGGAAGGTGCCCGCAAGGCCAACCCCGTGATCCTCGAGCCGATGATGGCCGTGGAAGTCGAGACGCCCGAAGACTACGCCGGCAACGTGATGGGCGACCTGTCGTCCCGCCGCGGCATGGTGCAGGGCATGGACGACATGGTCGGTGGCGGCAAGGCCATCAAGGCAGAAGTGCCGCTGTCGGAAATGTTCGGCTACTCGACCACGCTGCGCTCGATGTCGCAAGGCCGTGCCACGTACACGATGGAGTTCAAGCACTACGCTGAAGCTCCGCGCAACGTCGCCGAAGCCATCGTGGCCGCTCGCGCCAAGTAA
PROTEIN sequence
Length: 700
MSRKTPIERYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERGITITSAATTCFWKGMAGKFDEHRINIIDTPGHVDFTIEVERSMRVLDGAVMVYDAVGGVQPQSETVWRQANKYKVPRLAFVNKMDRTGADFLRVRQMMIDRLKANPVVIQIPIGAEEHFQGIVDLVKMKAIIWDEDKGVTFQYGDIPANLTDVCNEYREKLVEAAAEASEELMNKYLEGGELSEEEIKKAIRQRTIAGEIQPMLCGSAFKNKGVQAMLDAVVEYMPSPLDIPPVAGLDEDEAPVVRKADDNEKFSALAFKLMTDPFVGQLTFVRVYSGVLTKGDSVYNPVRGKKERIGRIVQMHANNREEVNEIRAGDIAACVGLKEVTTGETLCDPTAVVTLERMVFPESVISQAVEPKTKADQEKMGIALQRLAQEDPSFRVKTDEESGQTIIAGMGELHLEIIVDRMKREFGVEANVGKPQVAYRETIRKTVEEAEGKFVRQSGGKGQYGHVILKLEPQEAGKGFEFVDAIKGGVVPREYIPAVEKGVVEALTQGVLAGYPVVDVKVTLHFGSYHDVDSNEMAFKMAAIFGFKEGARKANPVILEPMMAVEVETPEDYAGNVMGDLSSRRGMVQGMDDMVGGGKAIKAEVPLSEMFGYSTTLRSMSQGRATYTMEFKHYAEAPRNVAEAIVAARAK*