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SCNpilot_cont_300_bf_scaffold_74_curated_3

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(2447..2920)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S7 n=2 Tax=Variovorax RepID=RS7_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 157.0
  • Bit_score: 312
  • Evalue 1.80e-82
  • rbh
30S ribosomal protein S7; K02992 small subunit ribosomal protein S7 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 157.0
  • Bit_score: 312
  • Evalue 5.70e-83
30S ribosomal protein S7 {ECO:0000255|HAMAP-Rule:MF_00480}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 157.0
  • Bit_score: 312
  • Evalue 2.60e-82

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 474
ATGCCACGTCGTCGCGAAGTCCCCAAACGTGAAATCCTGCCGGATCCCAAGTACGGCAATGTCGAGCTGTCGAAATTCATGAACGTGATCATGGAAGGCGGCAAGAAGGCTGTTGCCGAGCGCATCATCTACGGTGCACTCGACTTCATCGAAAAGAAGAACCCGGACAAGGACCCCCTCGAAGCGTTCACCGTTGCCATCAACAACGTGAAGCCGATGGTCGAAGTGAAGTCGCGCCGCGTCGGCGGTGCGAACTATCAAGTGCCGGTCGAAGTCCGTCCCGTCCGTCGCCTCGCCCTGTCGATGCGCTGGATCAAGGAAGCCGCCCGCAAGCGCGGTGAGAAGTCGATGGCCCTGCGTCTGGCCAACGAACTGATGGAAGCCACGGAAGGCCGTGGCGGTGCCATGAAGAAGCGCGACGAAGTGCACCGCATGGCAGAAGCCAACCGGGCGTTCAGCCACTTCCGCTTCTAA
PROTEIN sequence
Length: 158
MPRRREVPKREILPDPKYGNVELSKFMNVIMEGGKKAVAERIIYGALDFIEKKNPDKDPLEAFTVAINNVKPMVEVKSRRVGGANYQVPVEVRPVRRLALSMRWIKEAARKRGEKSMALRLANELMEATEGRGGAMKKRDEVHRMAEANRAFSHFRF*