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SCNpilot_cont_300_bf_scaffold_74_curated_4

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(3074..3382)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S12 n=1 Tax=Curvibacter lanceolatus RepID=UPI0001056121 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 102.0
  • Bit_score: 208
  • Evalue 4.10e-51
rpsL; 30S ribosomal protein S12 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 102.0
  • Bit_score: 208
  • Evalue 1.30e-51
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 102.0
  • Bit_score: 208
  • Evalue 5.80e-51

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 309
ATGCAGAACTCGCCGCAACGTCGCGGTGTCTGCACCCGCGTCTACACCACGACGCCCAAGAAGCCCAACTCGGCGCTTCGTAAAGTTGCCAAGGTCCGTCTGACCAATGGCTTCGAAGTCATCTCCTACATCGGCGGCGAAGGCCACAACCTGCAGGAACACAGCGTCGTGCTGGTTCGCGGCGGTCGTGTCAAGGACTTGCCCGGTGTGCGTTACCACATCGTGCGCGGTTCGCTGGACCTGCAAGGCGTGAAAGACCGCAAGCAGTCGCGTTCCAAGTACGGCGCGAAGCGTCCCAAGAAGGCTTAA
PROTEIN sequence
Length: 103
MQNSPQRRGVCTRVYTTTPKKPNSALRKVAKVRLTNGFEVISYIGGEGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGSLDLQGVKDRKQSRSKYGAKRPKKA*