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SCNpilot_cont_300_bf_scaffold_74_curated_25

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(21427..22302)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Variovorax paradoxus RepID=UPI00037E3877 similarity UNIREF
DB: UNIREF100
  • Identity: 97.6
  • Coverage: 291.0
  • Bit_score: 554
  • Evalue 5.10e-155
putative branched-chain amino acid ABC transporter, permease protein similarity KEGG
DB: KEGG
  • Identity: 97.6
  • Coverage: 291.0
  • Bit_score: 551
  • Evalue 1.40e-154
Inner-membrane translocator {ECO:0000313|EMBL:ADU39774.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.3
  • Coverage: 291.0
  • Bit_score: 551
  • Evalue 6.10e-154

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 876
ATGCAGATTCTTCAACTGCTGCTGTCGGGCATCGCGCAGGGCTGCATCTACGGCCTGATCGCGCTGGGCTTCGTGCTGATCTACAAGGCCACCGAGACCGTGAGCTTCGCGCAGGGCGACCTGATGATGCTGGGCGCCTTCGGCGCGTTCGCGGGCATGTCGCTGTTCGGCATGCCGTTCTGGCTCGCGGCCATCCTCGCGGTGGTGGCGATGGCGGCCTTCGGCGTGCTGCTGGAGCTGGTGGTGATCCGCTCGATCCTGGGGCAGCCGCAGTTCTCCATCGTCATGCTGACCATCGGCATCGCCTACGTGGCGCGTGGTGTCATCACCATGGTGCCCGGCATCGGCACCGAGACCCACACGCTGGCCGTGCCCTACAAGGACCAGATCTGGAAGCTGGGCGAGCTGGTGGTCAACCTGGAGCAGCTCGCGATCATCATCGCCACCGCGGTGCTGTGCGGCCTGCTGTTCGCGATGTTCCGCTACAGCAAGCTCGGCATCGCGATGCAGGCCTCGTCGCAGAACCAGCTGGCGGCCTACTACATGGGCATTCCGGTGAAGCGGCTCAACGGGCTGGTGTGGGGCCTGGCGGCGGCGGTGGCGGCGATTGCGGGCATGCTGCTCGCGCCCATCACCTTCGTGCACGCGAACATGGGCTTCATCGGGCTCAAGGCCTTTCCGGCGGCGGTGGTGGGCGGCTTCGGCAGCCTGCCCGGCGCGATCGTCGGCGGGCTGGTCATCGGCATCGTCGAGTCGTTCGCGGGCTTCTACCTGCCGGACGGCTTCAAGGACACGGCGCCGTACATCGTGGTGTTGCTGATGCTCATGATCAAGCCCAACGGGCTGTTCGGCGAAAAGCTCCGCAAGAAGGTGTAA
PROTEIN sequence
Length: 292
MQILQLLLSGIAQGCIYGLIALGFVLIYKATETVSFAQGDLMMLGAFGAFAGMSLFGMPFWLAAILAVVAMAAFGVLLELVVIRSILGQPQFSIVMLTIGIAYVARGVITMVPGIGTETHTLAVPYKDQIWKLGELVVNLEQLAIIIATAVLCGLLFAMFRYSKLGIAMQASSQNQLAAYYMGIPVKRLNGLVWGLAAAVAAIAGMLLAPITFVHANMGFIGLKAFPAAVVGGFGSLPGAIVGGLVIGIVESFAGFYLPDGFKDTAPYIVVLLMLMIKPNGLFGEKLRKKV*